Strain Fitness in Escherichia coli BL21 around ECD_03854

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03853 and ECD_03854 overlap by 4 nucleotidesECD_03854 and ECD_03855 are separated by 28 nucleotides ECD_03853: ECD_03853 - UDP-N-acetylenolpyruvoylglucosamine reductase, FAD-binding, at 4,080,108 to 4,081,136 _03853 ECD_03854: ECD_03854 - bifunctional biotin-[acetylCoA carboxylase] holoenzyme synthetase/ DNA-binding transcriptional repressor, bio-5'-AMP-binding, at 4,081,133 to 4,082,098 _03854 ECD_03855: ECD_03855 - pantothenate kinase, at 4,082,127 to 4,083,077 _03855 Position (kb) 4081 4082 4083Strain fitness (log2 ratio) -3 -2 -1 0 1at 4083.070 kb on - strandat 4083.071 kb on + strandat 4083.072 kb on - strandat 4083.077 kb on + strandat 4083.078 kb on - strandat 4083.078 kb on - strandat 4083.078 kb on - strandat 4083.078 kb on - strandat 4083.078 kb on - strandat 4083.078 kb on - strandat 4083.078 kb on - strandat 4083.078 kb on - strandat 4083.098 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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4,083,070 - -0.1
4,083,071 + +0.4
4,083,072 - -0.9
4,083,077 + -0.1
4,083,078 - +0.2
4,083,078 - +0.3
4,083,078 - -0.2
4,083,078 - -0.3
4,083,078 - -0.3
4,083,078 - -1.6
4,083,078 - -0.1
4,083,078 - -0.3
4,083,098 + -3.1

Or see this region's nucleotide sequence