Strain Fitness in Escherichia coli BL21 around ECD_03751

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03750 and ECD_03751 are separated by 581 nucleotidesECD_03751 and ECD_03752 are separated by 188 nucleotides ECD_03750: ECD_03750 - cell division GTP-binding protein, at 3,956,870 to 3,957,502 _03750 ECD_03751: ECD_03751 - activator of Der GTPase, at 3,958,084 to 3,958,593 _03751 ECD_03752: ECD_03752 - coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen-independent, at 3,958,782 to 3,960,155 _03752 Position (kb) 3958 3959Strain fitness (log2 ratio) -1 0 1 2 3at 3957.555 kb on + strandat 3957.555 kb on + strandat 3957.556 kb on - strandat 3957.556 kb on - strandat 3957.556 kb on - strandat 3957.765 kb on + strandat 3957.765 kb on + strandat 3957.954 kb on - strandat 3957.954 kb on - strandat 3957.998 kb on - strandat 3958.051 kb on - strandat 3958.278 kb on + strand, within ECD_03751at 3958.278 kb on + strand, within ECD_03751at 3958.279 kb on - strand, within ECD_03751at 3958.279 kb on - strand, within ECD_03751at 3958.279 kb on - strand, within ECD_03751at 3958.279 kb on - strand, within ECD_03751at 3958.288 kb on - strand, within ECD_03751at 3958.356 kb on + strand, within ECD_03751at 3958.386 kb on - strand, within ECD_03751at 3958.488 kb on + strand, within ECD_03751at 3958.522 kb on + strand, within ECD_03751at 3958.523 kb on - strand, within ECD_03751at 3958.523 kb on - strand, within ECD_03751at 3958.641 kb on + strandat 3958.641 kb on + strandat 3958.643 kb on + strandat 3958.643 kb on + strandat 3958.643 kb on + strandat 3958.643 kb on + strandat 3958.644 kb on - strandat 3958.644 kb on - strandat 3958.648 kb on + strandat 3958.648 kb on + strandat 3958.649 kb on - strandat 3958.674 kb on - strandat 3958.827 kb on + strandat 3958.828 kb on - strandat 3958.828 kb on - strandat 3958.828 kb on - strandat 3958.829 kb on + strandat 3958.829 kb on + strandat 3958.830 kb on - strandat 3958.830 kb on - strandat 3958.849 kb on - strandat 3958.849 kb on - strandat 3958.849 kb on - strandat 3958.906 kb on + strandat 3958.939 kb on + strand, within ECD_03752at 3958.939 kb on + strand, within ECD_03752at 3958.940 kb on - strand, within ECD_03752at 3958.947 kb on + strand, within ECD_03752at 3958.948 kb on - strand, within ECD_03752at 3958.951 kb on + strand, within ECD_03752at 3958.951 kb on + strand, within ECD_03752at 3958.951 kb on + strand, within ECD_03752at 3958.951 kb on + strand, within ECD_03752at 3958.951 kb on + strand, within ECD_03752at 3958.951 kb on + strand, within ECD_03752at 3958.951 kb on + strand, within ECD_03752at 3958.952 kb on - strand, within ECD_03752at 3958.952 kb on - strand, within ECD_03752at 3958.952 kb on - strand, within ECD_03752at 3958.952 kb on - strand, within ECD_03752at 3958.952 kb on - strand, within ECD_03752at 3958.952 kb on - strand, within ECD_03752at 3958.955 kb on + strand, within ECD_03752at 3958.970 kb on + strand, within ECD_03752at 3958.970 kb on + strand, within ECD_03752at 3958.998 kb on - strand, within ECD_03752at 3959.034 kb on + strand, within ECD_03752at 3959.035 kb on - strand, within ECD_03752at 3959.131 kb on - strand, within ECD_03752at 3959.245 kb on + strand, within ECD_03752at 3959.257 kb on + strand, within ECD_03752at 3959.367 kb on - strand, within ECD_03752at 3959.501 kb on + strand, within ECD_03752at 3959.501 kb on + strand, within ECD_03752at 3959.502 kb on - strand, within ECD_03752at 3959.505 kb on + strand, within ECD_03752at 3959.506 kb on - strand, within ECD_03752at 3959.506 kb on - strand, within ECD_03752at 3959.506 kb on - strand, within ECD_03752at 3959.506 kb on - strand, within ECD_03752

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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3,957,555 + +0.2
3,957,555 + -0.1
3,957,556 - -0.1
3,957,556 - +0.2
3,957,556 - +0.0
3,957,765 + +0.5
3,957,765 + +0.6
3,957,954 - +1.0
3,957,954 - -0.2
3,957,998 - +1.1
3,958,051 - +1.0
3,958,278 + ECD_03751 0.38 -1.6
3,958,278 + ECD_03751 0.38 -0.7
3,958,279 - ECD_03751 0.38 -0.9
3,958,279 - ECD_03751 0.38 -0.4
3,958,279 - ECD_03751 0.38 +0.1
3,958,279 - ECD_03751 0.38 -0.6
3,958,288 - ECD_03751 0.40 +0.5
3,958,356 + ECD_03751 0.53 +0.6
3,958,386 - ECD_03751 0.59 +0.4
3,958,488 + ECD_03751 0.79 +0.4
3,958,522 + ECD_03751 0.86 +0.6
3,958,523 - ECD_03751 0.86 -0.4
3,958,523 - ECD_03751 0.86 -0.9
3,958,641 + -0.4
3,958,641 + +0.5
3,958,643 + +0.1
3,958,643 + +0.2
3,958,643 + +1.1
3,958,643 + -0.2
3,958,644 - +0.1
3,958,644 - +0.6
3,958,648 + -0.7
3,958,648 + -0.1
3,958,649 - +0.6
3,958,674 - +0.7
3,958,827 + +2.0
3,958,828 - -0.1
3,958,828 - +1.5
3,958,828 - +2.2
3,958,829 + +2.6
3,958,829 + +0.7
3,958,830 - +1.7
3,958,830 - +0.3
3,958,849 - +1.3
3,958,849 - -0.4
3,958,849 - +1.4
3,958,906 + +0.5
3,958,939 + ECD_03752 0.11 +0.5
3,958,939 + ECD_03752 0.11 +1.3
3,958,940 - ECD_03752 0.11 +1.0
3,958,947 + ECD_03752 0.12 +0.6
3,958,948 - ECD_03752 0.12 +1.0
3,958,951 + ECD_03752 0.12 +1.4
3,958,951 + ECD_03752 0.12 +0.2
3,958,951 + ECD_03752 0.12 +1.9
3,958,951 + ECD_03752 0.12 +0.7
3,958,951 + ECD_03752 0.12 -0.7
3,958,951 + ECD_03752 0.12 -0.2
3,958,951 + ECD_03752 0.12 +1.6
3,958,952 - ECD_03752 0.12 +1.4
3,958,952 - ECD_03752 0.12 +0.9
3,958,952 - ECD_03752 0.12 +1.3
3,958,952 - ECD_03752 0.12 -1.2
3,958,952 - ECD_03752 0.12 +1.6
3,958,952 - ECD_03752 0.12 +0.4
3,958,955 + ECD_03752 0.13 +0.8
3,958,970 + ECD_03752 0.14 +2.2
3,958,970 + ECD_03752 0.14 +1.0
3,958,998 - ECD_03752 0.16 +0.7
3,959,034 + ECD_03752 0.18 +1.0
3,959,035 - ECD_03752 0.18 +0.2
3,959,131 - ECD_03752 0.25 +1.6
3,959,245 + ECD_03752 0.34 +0.9
3,959,257 + ECD_03752 0.35 +1.6
3,959,367 - ECD_03752 0.43 +1.9
3,959,501 + ECD_03752 0.52 +1.6
3,959,501 + ECD_03752 0.52 +0.8
3,959,502 - ECD_03752 0.52 +0.4
3,959,505 + ECD_03752 0.53 +1.1
3,959,506 - ECD_03752 0.53 +1.8
3,959,506 - ECD_03752 0.53 +3.6
3,959,506 - ECD_03752 0.53 +1.8
3,959,506 - ECD_03752 0.53 +0.6

Or see this region's nucleotide sequence