Experiment: NoPhageControl
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03750 and ECD_03751 are separated by 581 nucleotides ECD_03751 and ECD_03752 are separated by 188 nucleotides
ECD_03750: ECD_03750 - cell division GTP-binding protein, at 3,956,870 to 3,957,502
_03750
ECD_03751: ECD_03751 - activator of Der GTPase, at 3,958,084 to 3,958,593
_03751
ECD_03752: ECD_03752 - coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen-independent, at 3,958,782 to 3,960,155
_03752
Position (kb)
3958
3959 Strain fitness (log2 ratio)
-1
0
1
2
3 at 3957.555 kb on + strand at 3957.555 kb on + strand at 3957.556 kb on - strand at 3957.556 kb on - strand at 3957.556 kb on - strand at 3957.765 kb on + strand at 3957.765 kb on + strand at 3957.954 kb on - strand at 3957.954 kb on - strand at 3957.998 kb on - strand at 3958.051 kb on - strand at 3958.278 kb on + strand, within ECD_03751 at 3958.278 kb on + strand, within ECD_03751 at 3958.279 kb on - strand, within ECD_03751 at 3958.279 kb on - strand, within ECD_03751 at 3958.279 kb on - strand, within ECD_03751 at 3958.279 kb on - strand, within ECD_03751 at 3958.288 kb on - strand, within ECD_03751 at 3958.356 kb on + strand, within ECD_03751 at 3958.386 kb on - strand, within ECD_03751 at 3958.488 kb on + strand, within ECD_03751 at 3958.522 kb on + strand, within ECD_03751 at 3958.523 kb on - strand, within ECD_03751 at 3958.523 kb on - strand, within ECD_03751 at 3958.641 kb on + strand at 3958.641 kb on + strand at 3958.643 kb on + strand at 3958.643 kb on + strand at 3958.643 kb on + strand at 3958.643 kb on + strand at 3958.644 kb on - strand at 3958.644 kb on - strand at 3958.648 kb on + strand at 3958.648 kb on + strand at 3958.649 kb on - strand at 3958.674 kb on - strand at 3958.827 kb on + strand at 3958.828 kb on - strand at 3958.828 kb on - strand at 3958.828 kb on - strand at 3958.829 kb on + strand at 3958.829 kb on + strand at 3958.830 kb on - strand at 3958.830 kb on - strand at 3958.849 kb on - strand at 3958.849 kb on - strand at 3958.849 kb on - strand at 3958.906 kb on + strand at 3958.939 kb on + strand, within ECD_03752 at 3958.939 kb on + strand, within ECD_03752 at 3958.940 kb on - strand, within ECD_03752 at 3958.947 kb on + strand, within ECD_03752 at 3958.948 kb on - strand, within ECD_03752 at 3958.951 kb on + strand, within ECD_03752 at 3958.951 kb on + strand, within ECD_03752 at 3958.951 kb on + strand, within ECD_03752 at 3958.951 kb on + strand, within ECD_03752 at 3958.951 kb on + strand, within ECD_03752 at 3958.951 kb on + strand, within ECD_03752 at 3958.951 kb on + strand, within ECD_03752 at 3958.952 kb on - strand, within ECD_03752 at 3958.952 kb on - strand, within ECD_03752 at 3958.952 kb on - strand, within ECD_03752 at 3958.952 kb on - strand, within ECD_03752 at 3958.952 kb on - strand, within ECD_03752 at 3958.952 kb on - strand, within ECD_03752 at 3958.955 kb on + strand, within ECD_03752 at 3958.970 kb on + strand, within ECD_03752 at 3958.970 kb on + strand, within ECD_03752 at 3958.998 kb on - strand, within ECD_03752 at 3959.034 kb on + strand, within ECD_03752 at 3959.035 kb on - strand, within ECD_03752 at 3959.131 kb on - strand, within ECD_03752 at 3959.245 kb on + strand, within ECD_03752 at 3959.257 kb on + strand, within ECD_03752 at 3959.367 kb on - strand, within ECD_03752 at 3959.501 kb on + strand, within ECD_03752 at 3959.501 kb on + strand, within ECD_03752 at 3959.502 kb on - strand, within ECD_03752 at 3959.505 kb on + strand, within ECD_03752 at 3959.506 kb on - strand, within ECD_03752 at 3959.506 kb on - strand, within ECD_03752 at 3959.506 kb on - strand, within ECD_03752 at 3959.506 kb on - strand, within ECD_03752
Per-strain Table
Position Strand Gene LocusTag Fraction NoPhageControl remove 3,957,555 + +0.2 3,957,555 + -0.1 3,957,556 - -0.1 3,957,556 - +0.2 3,957,556 - +0.0 3,957,765 + +0.5 3,957,765 + +0.6 3,957,954 - +1.0 3,957,954 - -0.2 3,957,998 - +1.1 3,958,051 - +1.0 3,958,278 + ECD_03751 0.38 -1.6 3,958,278 + ECD_03751 0.38 -0.7 3,958,279 - ECD_03751 0.38 -0.9 3,958,279 - ECD_03751 0.38 -0.4 3,958,279 - ECD_03751 0.38 +0.1 3,958,279 - ECD_03751 0.38 -0.6 3,958,288 - ECD_03751 0.40 +0.5 3,958,356 + ECD_03751 0.53 +0.6 3,958,386 - ECD_03751 0.59 +0.4 3,958,488 + ECD_03751 0.79 +0.4 3,958,522 + ECD_03751 0.86 +0.6 3,958,523 - ECD_03751 0.86 -0.4 3,958,523 - ECD_03751 0.86 -0.9 3,958,641 + -0.4 3,958,641 + +0.5 3,958,643 + +0.1 3,958,643 + +0.2 3,958,643 + +1.1 3,958,643 + -0.2 3,958,644 - +0.1 3,958,644 - +0.6 3,958,648 + -0.7 3,958,648 + -0.1 3,958,649 - +0.6 3,958,674 - +0.7 3,958,827 + +2.0 3,958,828 - -0.1 3,958,828 - +1.5 3,958,828 - +2.2 3,958,829 + +2.6 3,958,829 + +0.7 3,958,830 - +1.7 3,958,830 - +0.3 3,958,849 - +1.3 3,958,849 - -0.4 3,958,849 - +1.4 3,958,906 + +0.5 3,958,939 + ECD_03752 0.11 +0.5 3,958,939 + ECD_03752 0.11 +1.3 3,958,940 - ECD_03752 0.11 +1.0 3,958,947 + ECD_03752 0.12 +0.6 3,958,948 - ECD_03752 0.12 +1.0 3,958,951 + ECD_03752 0.12 +1.4 3,958,951 + ECD_03752 0.12 +0.2 3,958,951 + ECD_03752 0.12 +1.9 3,958,951 + ECD_03752 0.12 +0.7 3,958,951 + ECD_03752 0.12 -0.7 3,958,951 + ECD_03752 0.12 -0.2 3,958,951 + ECD_03752 0.12 +1.6 3,958,952 - ECD_03752 0.12 +1.4 3,958,952 - ECD_03752 0.12 +0.9 3,958,952 - ECD_03752 0.12 +1.3 3,958,952 - ECD_03752 0.12 -1.2 3,958,952 - ECD_03752 0.12 +1.6 3,958,952 - ECD_03752 0.12 +0.4 3,958,955 + ECD_03752 0.13 +0.8 3,958,970 + ECD_03752 0.14 +2.2 3,958,970 + ECD_03752 0.14 +1.0 3,958,998 - ECD_03752 0.16 +0.7 3,959,034 + ECD_03752 0.18 +1.0 3,959,035 - ECD_03752 0.18 +0.2 3,959,131 - ECD_03752 0.25 +1.6 3,959,245 + ECD_03752 0.34 +0.9 3,959,257 + ECD_03752 0.35 +1.6 3,959,367 - ECD_03752 0.43 +1.9 3,959,501 + ECD_03752 0.52 +1.6 3,959,501 + ECD_03752 0.52 +0.8 3,959,502 - ECD_03752 0.52 +0.4 3,959,505 + ECD_03752 0.53 +1.1 3,959,506 - ECD_03752 0.53 +1.8 3,959,506 - ECD_03752 0.53 +3.6 3,959,506 - ECD_03752 0.53 +1.8 3,959,506 - ECD_03752 0.53 +0.6
Or see this region's nucleotide sequence