Experiment: NoPhageControl
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03612 and ECD_03613 are separated by 313 nucleotides ECD_03613 and ECD_03614 are separated by 161 nucleotides
ECD_03612: ECD_03612 - phosphate ABC transporter periplasmic binding protein, at 3,799,286 to 3,800,326
_03612
ECD_03613: ECD_03613 - L-glutamine:D-fructose-6-phosphate aminotransferase, at 3,800,640 to 3,802,469
_03613
ECD_03614: ECD_03614 - fused N-acetyl glucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyl transferase, at 3,802,631 to 3,804,001
_03614
Position (kb)
3800
3801
3802
3803 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3799.655 kb on - strand, within ECD_03612 at 3799.660 kb on - strand, within ECD_03612 at 3799.666 kb on - strand, within ECD_03612 at 3799.666 kb on - strand, within ECD_03612 at 3799.666 kb on - strand, within ECD_03612 at 3799.666 kb on - strand, within ECD_03612 at 3799.760 kb on - strand, within ECD_03612 at 3799.769 kb on - strand, within ECD_03612 at 3799.769 kb on - strand, within ECD_03612 at 3799.810 kb on - strand, within ECD_03612 at 3799.810 kb on - strand, within ECD_03612 at 3799.857 kb on - strand, within ECD_03612 at 3799.857 kb on - strand, within ECD_03612 at 3799.857 kb on - strand, within ECD_03612 at 3799.857 kb on - strand, within ECD_03612 at 3799.942 kb on - strand, within ECD_03612 at 3799.942 kb on - strand, within ECD_03612 at 3799.942 kb on - strand, within ECD_03612 at 3799.961 kb on - strand, within ECD_03612 at 3800.108 kb on - strand, within ECD_03612 at 3800.145 kb on - strand, within ECD_03612 at 3800.145 kb on - strand, within ECD_03612 at 3800.145 kb on - strand, within ECD_03612 at 3800.145 kb on - strand, within ECD_03612 at 3800.145 kb on - strand, within ECD_03612 at 3800.155 kb on - strand, within ECD_03612 at 3800.159 kb on - strand, within ECD_03612 at 3800.159 kb on - strand, within ECD_03612 at 3800.159 kb on - strand, within ECD_03612 at 3800.185 kb on - strand, within ECD_03612 at 3800.206 kb on - strand, within ECD_03612 at 3800.318 kb on - strand at 3800.327 kb on - strand at 3800.349 kb on - strand at 3800.402 kb on - strand at 3800.404 kb on - strand at 3800.404 kb on - strand at 3800.404 kb on - strand at 3800.404 kb on - strand at 3800.404 kb on - strand at 3800.404 kb on - strand at 3800.404 kb on - strand at 3800.404 kb on - strand at 3800.407 kb on + strand at 3800.408 kb on - strand at 3800.426 kb on - strand at 3800.597 kb on + strand at 3800.638 kb on + strand at 3800.638 kb on + strand at 3800.638 kb on + strand at 3802.555 kb on - strand at 3802.563 kb on - strand at 3802.563 kb on - strand at 3802.563 kb on - strand at 3802.563 kb on - strand at 3802.567 kb on - strand at 3802.567 kb on - strand at 3802.567 kb on - strand at 3802.567 kb on - strand at 3802.567 kb on - strand at 3802.587 kb on + strand at 3802.587 kb on + strand at 3802.588 kb on - strand at 3802.588 kb on - strand at 3802.588 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NoPhageControl remove 3,799,655 - ECD_03612 0.35 -0.4 3,799,660 - ECD_03612 0.36 -1.3 3,799,666 - ECD_03612 0.37 +0.1 3,799,666 - ECD_03612 0.37 -0.3 3,799,666 - ECD_03612 0.37 +0.8 3,799,666 - ECD_03612 0.37 -0.3 3,799,760 - ECD_03612 0.46 -0.8 3,799,769 - ECD_03612 0.46 +0.4 3,799,769 - ECD_03612 0.46 -2.9 3,799,810 - ECD_03612 0.50 -0.9 3,799,810 - ECD_03612 0.50 -0.1 3,799,857 - ECD_03612 0.55 +0.7 3,799,857 - ECD_03612 0.55 -1.5 3,799,857 - ECD_03612 0.55 -1.5 3,799,857 - ECD_03612 0.55 -0.2 3,799,942 - ECD_03612 0.63 -0.2 3,799,942 - ECD_03612 0.63 -1.1 3,799,942 - ECD_03612 0.63 -0.5 3,799,961 - ECD_03612 0.65 +0.4 3,800,108 - ECD_03612 0.79 +0.4 3,800,145 - ECD_03612 0.83 +1.4 3,800,145 - ECD_03612 0.83 -0.7 3,800,145 - ECD_03612 0.83 -0.1 3,800,145 - ECD_03612 0.83 +0.5 3,800,145 - ECD_03612 0.83 -0.9 3,800,155 - ECD_03612 0.83 +0.0 3,800,159 - ECD_03612 0.84 -2.0 3,800,159 - ECD_03612 0.84 +0.4 3,800,159 - ECD_03612 0.84 +2.6 3,800,185 - ECD_03612 0.86 -0.2 3,800,206 - ECD_03612 0.88 -1.2 3,800,318 - -0.3 3,800,327 - +0.2 3,800,349 - -0.6 3,800,402 - +1.0 3,800,404 - -0.6 3,800,404 - +0.4 3,800,404 - +0.8 3,800,404 - -0.1 3,800,404 - +0.5 3,800,404 - +0.5 3,800,404 - +0.8 3,800,404 - -0.4 3,800,407 + +0.9 3,800,408 - +0.8 3,800,426 - -0.3 3,800,597 + +0.1 3,800,638 + -0.6 3,800,638 + +0.3 3,800,638 + -0.6 3,802,555 - +0.1 3,802,563 - +0.2 3,802,563 - -0.8 3,802,563 - -0.1 3,802,563 - +0.2 3,802,567 - +0.8 3,802,567 - +0.4 3,802,567 - -0.3 3,802,567 - +0.3 3,802,567 - +0.6 3,802,587 + -0.7 3,802,587 + +1.1 3,802,588 - +0.5 3,802,588 - -0.6 3,802,588 - +0.1
Or see this region's nucleotide sequence