Strain Fitness in Escherichia coli BL21 around ECD_03466

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03464 and ECD_03465 are separated by 52 nucleotidesECD_03465 and ECD_03466 are separated by 79 nucleotidesECD_03466 and ECD_03467 overlap by 1 nucleotidesECD_03467 and ECD_03468 are separated by 62 nucleotidesECD_03468 and ECD_03469 are separated by 141 nucleotides ECD_03464: ECD_03464 - tRNA Leu mC34,mU34 2'-O-methyltransferase, SAM-dependent, at 3,650,416 to 3,650,889 _03464 ECD_03465: ECD_03465 - serine acetyltransferase, at 3,650,942 to 3,651,763 _03465 ECD_03466: ECD_03466 - glycerol-3-phosphate dehydrogenase (NAD+), at 3,651,843 to 3,652,862 _03466 ECD_03467: ECD_03467 - protein export chaperone, at 3,652,862 to 3,653,329 _03467 ECD_03468: ECD_03468 - glutaredoxin 3, at 3,653,392 to 3,653,643 _03468 ECD_03469: ECD_03469 - putative rhodanese-related sulfurtransferase, at 3,653,785 to 3,654,216 _03469 Position (kb) 3651 3652 3653Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 3650.887 kb on + strandat 3650.887 kb on + strandat 3650.887 kb on + strandat 3650.888 kb on - strandat 3650.888 kb on - strandat 3650.888 kb on - strandat 3650.891 kb on + strandat 3650.891 kb on + strandat 3650.891 kb on + strandat 3650.892 kb on - strandat 3650.896 kb on + strandat 3650.896 kb on + strandat 3650.896 kb on + strandat 3650.913 kb on + strandat 3650.913 kb on + strandat 3650.913 kb on + strandat 3650.913 kb on + strandat 3650.914 kb on - strandat 3650.914 kb on - strandat 3650.914 kb on - strandat 3650.914 kb on - strandat 3650.914 kb on - strandat 3650.914 kb on - strandat 3650.914 kb on - strandat 3650.914 kb on - strandat 3650.943 kb on + strandat 3650.943 kb on + strandat 3650.943 kb on + strandat 3650.943 kb on + strandat 3650.943 kb on + strandat 3650.943 kb on + strandat 3650.943 kb on + strandat 3650.944 kb on - strandat 3650.944 kb on - strandat 3650.944 kb on - strandat 3650.944 kb on - strandat 3650.944 kb on - strandat 3650.944 kb on - strandat 3650.944 kb on - strandat 3650.944 kb on - strandat 3650.968 kb on + strandat 3650.969 kb on - strandat 3650.969 kb on - strandat 3650.969 kb on - strandat 3650.975 kb on - strandat 3651.038 kb on - strand, within ECD_03465at 3651.785 kb on + strandat 3651.785 kb on + strandat 3651.786 kb on - strandat 3651.786 kb on - strandat 3651.825 kb on - strandat 3653.358 kb on - strandat 3653.358 kb on - strandat 3653.362 kb on - strandat 3653.362 kb on - strandat 3653.374 kb on - strandat 3653.374 kb on - strandat 3653.394 kb on - strandat 3653.436 kb on - strand, within ECD_03468at 3653.436 kb on - strand, within ECD_03468at 3653.436 kb on - strand, within ECD_03468at 3653.436 kb on - strand, within ECD_03468at 3653.436 kb on - strand, within ECD_03468at 3653.625 kb on - strandat 3653.625 kb on - strandat 3653.719 kb on - strandat 3653.719 kb on - strandat 3653.719 kb on - strandat 3653.720 kb on + strandat 3653.720 kb on + strandat 3653.721 kb on - strandat 3653.726 kb on + strandat 3653.726 kb on + strandat 3653.852 kb on - strand, within ECD_03469at 3653.852 kb on - strand, within ECD_03469

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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3,650,887 + +0.4
3,650,887 + +0.9
3,650,887 + +0.4
3,650,888 - +0.1
3,650,888 - -1.5
3,650,888 - -0.5
3,650,891 + +0.3
3,650,891 + -1.1
3,650,891 + +0.0
3,650,892 - +0.5
3,650,896 + -1.0
3,650,896 + -0.7
3,650,896 + +0.3
3,650,913 + +0.3
3,650,913 + +0.6
3,650,913 + -0.4
3,650,913 + +0.8
3,650,914 - -0.4
3,650,914 - -0.4
3,650,914 - -0.5
3,650,914 - +0.8
3,650,914 - +0.7
3,650,914 - +0.2
3,650,914 - -1.3
3,650,914 - -0.2
3,650,943 + -0.1
3,650,943 + +1.2
3,650,943 + +0.7
3,650,943 + +0.7
3,650,943 + +0.2
3,650,943 + -0.4
3,650,943 + +0.2
3,650,944 - -0.5
3,650,944 - +0.6
3,650,944 - +0.5
3,650,944 - +0.7
3,650,944 - +2.0
3,650,944 - +0.3
3,650,944 - -0.8
3,650,944 - +0.5
3,650,968 + +1.2
3,650,969 - +0.2
3,650,969 - +2.2
3,650,969 - +0.1
3,650,975 - -1.1
3,651,038 - ECD_03465 0.12 -0.3
3,651,785 + +0.5
3,651,785 + +1.1
3,651,786 - -1.0
3,651,786 - -0.1
3,651,825 - +0.2
3,653,358 - +0.0
3,653,358 - -0.6
3,653,362 - -1.0
3,653,362 - -0.3
3,653,374 - +0.2
3,653,374 - +0.5
3,653,394 - -0.3
3,653,436 - ECD_03468 0.17 +0.7
3,653,436 - ECD_03468 0.17 -0.2
3,653,436 - ECD_03468 0.17 +0.0
3,653,436 - ECD_03468 0.17 -0.4
3,653,436 - ECD_03468 0.17 +0.2
3,653,625 - -0.4
3,653,625 - +0.3
3,653,719 - +0.5
3,653,719 - +0.3
3,653,719 - -0.2
3,653,720 + -3.3
3,653,720 + +0.5
3,653,721 - -0.4
3,653,726 + +1.2
3,653,726 + +0.4
3,653,852 - ECD_03469 0.16 +0.1
3,653,852 - ECD_03469 0.16 +1.2

Or see this region's nucleotide sequence