Experiment: NoPhageControl
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03464 and ECD_03465 are separated by 52 nucleotides ECD_03465 and ECD_03466 are separated by 79 nucleotides ECD_03466 and ECD_03467 overlap by 1 nucleotides ECD_03467 and ECD_03468 are separated by 62 nucleotides ECD_03468 and ECD_03469 are separated by 141 nucleotides
ECD_03464: ECD_03464 - tRNA Leu mC34,mU34 2'-O-methyltransferase, SAM-dependent, at 3,650,416 to 3,650,889
_03464
ECD_03465: ECD_03465 - serine acetyltransferase, at 3,650,942 to 3,651,763
_03465
ECD_03466: ECD_03466 - glycerol-3-phosphate dehydrogenase (NAD+), at 3,651,843 to 3,652,862
_03466
ECD_03467: ECD_03467 - protein export chaperone, at 3,652,862 to 3,653,329
_03467
ECD_03468: ECD_03468 - glutaredoxin 3, at 3,653,392 to 3,653,643
_03468
ECD_03469: ECD_03469 - putative rhodanese-related sulfurtransferase, at 3,653,785 to 3,654,216
_03469
Position (kb)
3651
3652
3653 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3650.887 kb on + strand at 3650.887 kb on + strand at 3650.887 kb on + strand at 3650.888 kb on - strand at 3650.888 kb on - strand at 3650.888 kb on - strand at 3650.891 kb on + strand at 3650.891 kb on + strand at 3650.891 kb on + strand at 3650.892 kb on - strand at 3650.896 kb on + strand at 3650.896 kb on + strand at 3650.896 kb on + strand at 3650.913 kb on + strand at 3650.913 kb on + strand at 3650.913 kb on + strand at 3650.913 kb on + strand at 3650.914 kb on - strand at 3650.914 kb on - strand at 3650.914 kb on - strand at 3650.914 kb on - strand at 3650.914 kb on - strand at 3650.914 kb on - strand at 3650.914 kb on - strand at 3650.914 kb on - strand at 3650.943 kb on + strand at 3650.943 kb on + strand at 3650.943 kb on + strand at 3650.943 kb on + strand at 3650.943 kb on + strand at 3650.943 kb on + strand at 3650.943 kb on + strand at 3650.944 kb on - strand at 3650.944 kb on - strand at 3650.944 kb on - strand at 3650.944 kb on - strand at 3650.944 kb on - strand at 3650.944 kb on - strand at 3650.944 kb on - strand at 3650.944 kb on - strand at 3650.968 kb on + strand at 3650.969 kb on - strand at 3650.969 kb on - strand at 3650.969 kb on - strand at 3650.975 kb on - strand at 3651.038 kb on - strand, within ECD_03465 at 3651.785 kb on + strand at 3651.785 kb on + strand at 3651.786 kb on - strand at 3651.786 kb on - strand at 3651.825 kb on - strand at 3653.358 kb on - strand at 3653.358 kb on - strand at 3653.362 kb on - strand at 3653.362 kb on - strand at 3653.374 kb on - strand at 3653.374 kb on - strand at 3653.394 kb on - strand at 3653.436 kb on - strand, within ECD_03468 at 3653.436 kb on - strand, within ECD_03468 at 3653.436 kb on - strand, within ECD_03468 at 3653.436 kb on - strand, within ECD_03468 at 3653.436 kb on - strand, within ECD_03468 at 3653.625 kb on - strand at 3653.625 kb on - strand at 3653.719 kb on - strand at 3653.719 kb on - strand at 3653.719 kb on - strand at 3653.720 kb on + strand at 3653.720 kb on + strand at 3653.721 kb on - strand at 3653.726 kb on + strand at 3653.726 kb on + strand at 3653.852 kb on - strand, within ECD_03469 at 3653.852 kb on - strand, within ECD_03469
Per-strain Table
Position Strand Gene LocusTag Fraction NoPhageControl remove 3,650,887 + +0.4 3,650,887 + +0.9 3,650,887 + +0.4 3,650,888 - +0.1 3,650,888 - -1.5 3,650,888 - -0.5 3,650,891 + +0.3 3,650,891 + -1.1 3,650,891 + +0.0 3,650,892 - +0.5 3,650,896 + -1.0 3,650,896 + -0.7 3,650,896 + +0.3 3,650,913 + +0.3 3,650,913 + +0.6 3,650,913 + -0.4 3,650,913 + +0.8 3,650,914 - -0.4 3,650,914 - -0.4 3,650,914 - -0.5 3,650,914 - +0.8 3,650,914 - +0.7 3,650,914 - +0.2 3,650,914 - -1.3 3,650,914 - -0.2 3,650,943 + -0.1 3,650,943 + +1.2 3,650,943 + +0.7 3,650,943 + +0.7 3,650,943 + +0.2 3,650,943 + -0.4 3,650,943 + +0.2 3,650,944 - -0.5 3,650,944 - +0.6 3,650,944 - +0.5 3,650,944 - +0.7 3,650,944 - +2.0 3,650,944 - +0.3 3,650,944 - -0.8 3,650,944 - +0.5 3,650,968 + +1.2 3,650,969 - +0.2 3,650,969 - +2.2 3,650,969 - +0.1 3,650,975 - -1.1 3,651,038 - ECD_03465 0.12 -0.3 3,651,785 + +0.5 3,651,785 + +1.1 3,651,786 - -1.0 3,651,786 - -0.1 3,651,825 - +0.2 3,653,358 - +0.0 3,653,358 - -0.6 3,653,362 - -1.0 3,653,362 - -0.3 3,653,374 - +0.2 3,653,374 - +0.5 3,653,394 - -0.3 3,653,436 - ECD_03468 0.17 +0.7 3,653,436 - ECD_03468 0.17 -0.2 3,653,436 - ECD_03468 0.17 +0.0 3,653,436 - ECD_03468 0.17 -0.4 3,653,436 - ECD_03468 0.17 +0.2 3,653,625 - -0.4 3,653,625 - +0.3 3,653,719 - +0.5 3,653,719 - +0.3 3,653,719 - -0.2 3,653,720 + -3.3 3,653,720 + +0.5 3,653,721 - -0.4 3,653,726 + +1.2 3,653,726 + +0.4 3,653,852 - ECD_03469 0.16 +0.1 3,653,852 - ECD_03469 0.16 +1.2
Or see this region's nucleotide sequence