Strain Fitness in Escherichia coli BL21 around ECD_03338

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03337 and ECD_03338 are separated by 365 nucleotidesECD_03338 and ECD_03339 are separated by 261 nucleotides ECD_03337: ECD_03337 - putative membrane fusion protein (MFP) of efflux pump, at 3,491,919 to 3,492,986 _03337 ECD_03338: ECD_03338 - DUF4049 family protein, at 3,493,352 to 3,494,974 _03338 ECD_03339: ECD_03339 - hypothetical protein, at 3,495,236 to 3,496,843 _03339 Position (kb) 3493 3494 3495Strain fitness (log2 ratio) -2 -1 0 1at 3492.426 kb on - strand, within ECD_03337at 3492.426 kb on - strand, within ECD_03337at 3492.445 kb on - strand, within ECD_03337at 3492.456 kb on - strand, within ECD_03337at 3492.816 kb on - strand, within ECD_03337at 3492.974 kb on + strandat 3492.975 kb on - strandat 3492.975 kb on - strandat 3493.009 kb on + strandat 3493.148 kb on + strandat 3493.148 kb on + strandat 3493.149 kb on - strandat 3493.149 kb on - strandat 3493.149 kb on - strandat 3493.149 kb on - strandat 3493.179 kb on - strandat 3493.194 kb on - strandat 3493.194 kb on - strandat 3493.200 kb on - strandat 3493.212 kb on + strandat 3493.213 kb on - strandat 3493.250 kb on - strandat 3493.302 kb on - strandat 3493.330 kb on + strandat 3493.331 kb on - strandat 3493.334 kb on - strandat 3493.362 kb on - strandat 3493.390 kb on + strandat 3493.391 kb on - strandat 3493.440 kb on - strandat 3493.474 kb on + strandat 3493.474 kb on + strandat 3493.475 kb on - strandat 3493.475 kb on - strandat 3493.475 kb on - strandat 3493.504 kb on + strandat 3493.593 kb on - strand, within ECD_03338at 3493.595 kb on - strand, within ECD_03338at 3493.598 kb on + strand, within ECD_03338at 3493.641 kb on + strand, within ECD_03338at 3493.814 kb on - strand, within ECD_03338at 3494.243 kb on + strand, within ECD_03338at 3494.390 kb on - strand, within ECD_03338at 3494.843 kb on - strandat 3495.009 kb on + strandat 3495.437 kb on - strand, within ECD_03339at 3495.955 kb on + strand, within ECD_03339

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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3,492,426 - ECD_03337 0.47 +0.3
3,492,426 - ECD_03337 0.47 +0.5
3,492,445 - ECD_03337 0.49 -1.1
3,492,456 - ECD_03337 0.50 +0.3
3,492,816 - ECD_03337 0.84 -0.4
3,492,974 + +0.4
3,492,975 - -0.1
3,492,975 - -1.0
3,493,009 + -0.5
3,493,148 + +1.0
3,493,148 + -0.4
3,493,149 - -0.2
3,493,149 - +1.0
3,493,149 - +0.6
3,493,149 - -0.7
3,493,179 - -0.1
3,493,194 - +0.9
3,493,194 - -1.6
3,493,200 - -0.6
3,493,212 + +0.3
3,493,213 - +0.3
3,493,250 - +0.4
3,493,302 - -0.2
3,493,330 + +0.4
3,493,331 - +0.6
3,493,334 - -0.2
3,493,362 - -1.4
3,493,390 + +0.6
3,493,391 - +0.4
3,493,440 - -0.4
3,493,474 + -2.3
3,493,474 + -0.5
3,493,475 - -2.2
3,493,475 - +0.3
3,493,475 - +0.3
3,493,504 + +0.7
3,493,593 - ECD_03338 0.15 -0.4
3,493,595 - ECD_03338 0.15 -0.4
3,493,598 + ECD_03338 0.15 -0.7
3,493,641 + ECD_03338 0.18 -0.0
3,493,814 - ECD_03338 0.28 -0.0
3,494,243 + ECD_03338 0.55 -0.1
3,494,390 - ECD_03338 0.64 +0.7
3,494,843 - -0.6
3,495,009 + -0.3
3,495,437 - ECD_03339 0.12 +0.6
3,495,955 + ECD_03339 0.45 +0.3

Or see this region's nucleotide sequence