Strain Fitness in Escherichia coli BL21 around ECD_03326

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03325 and ECD_03326 overlap by 1 nucleotidesECD_03326 and ECD_03327 overlap by 4 nucleotidesECD_03327 and ECD_03328 overlap by 1 nucleotides ECD_03325: ECD_03325 - nickel/heme ABC transporter periplasmic binding protein, at 3,476,051 to 3,477,625 _03325 ECD_03326: ECD_03326 - nickel ABC transporter permease, at 3,477,625 to 3,478,569 _03326 ECD_03327: ECD_03327 - nickel ABC transporter permease, at 3,478,566 to 3,479,399 _03327 ECD_03328: ECD_03328 - nickel ABC transporter ATPase, at 3,479,399 to 3,480,163 _03328 Position (kb) 3477 3478 3479Strain fitness (log2 ratio) -2 -1 0 1 2 3at 3476.639 kb on + strand, within ECD_03325at 3476.667 kb on - strand, within ECD_03325at 3476.784 kb on + strand, within ECD_03325at 3476.785 kb on - strand, within ECD_03325at 3476.787 kb on + strand, within ECD_03325at 3476.797 kb on + strand, within ECD_03325at 3476.813 kb on - strand, within ECD_03325at 3476.828 kb on + strand, within ECD_03325at 3476.924 kb on - strand, within ECD_03325at 3476.924 kb on - strand, within ECD_03325at 3476.967 kb on - strand, within ECD_03325at 3476.967 kb on - strand, within ECD_03325at 3477.014 kb on + strand, within ECD_03325at 3477.256 kb on + strand, within ECD_03325at 3477.257 kb on - strand, within ECD_03325at 3477.260 kb on + strand, within ECD_03325at 3477.260 kb on + strand, within ECD_03325at 3477.260 kb on + strand, within ECD_03325at 3477.260 kb on + strand, within ECD_03325at 3477.261 kb on - strand, within ECD_03325at 3477.320 kb on + strand, within ECD_03325at 3477.354 kb on + strand, within ECD_03325at 3477.515 kb on - strandat 3477.521 kb on + strandat 3477.521 kb on + strandat 3477.522 kb on - strandat 3477.522 kb on - strandat 3477.522 kb on - strandat 3477.522 kb on - strandat 3477.522 kb on - strandat 3477.522 kb on - strandat 3477.569 kb on + strandat 3477.608 kb on - strandat 3477.608 kb on - strandat 3477.638 kb on + strandat 3477.638 kb on + strandat 3477.638 kb on + strandat 3477.638 kb on + strandat 3477.639 kb on - strandat 3477.639 kb on - strandat 3477.639 kb on - strandat 3477.639 kb on - strandat 3477.639 kb on - strandat 3477.639 kb on - strandat 3477.639 kb on - strandat 3477.736 kb on + strand, within ECD_03326at 3477.817 kb on + strand, within ECD_03326at 3477.817 kb on + strand, within ECD_03326at 3477.817 kb on + strand, within ECD_03326at 3477.904 kb on - strand, within ECD_03326at 3477.954 kb on - strand, within ECD_03326at 3478.028 kb on + strand, within ECD_03326at 3478.105 kb on + strand, within ECD_03326at 3478.179 kb on + strand, within ECD_03326at 3478.179 kb on + strand, within ECD_03326at 3478.194 kb on + strand, within ECD_03326at 3478.465 kb on - strand, within ECD_03326at 3478.465 kb on - strand, within ECD_03326at 3478.465 kb on - strand, within ECD_03326at 3478.741 kb on + strand, within ECD_03327at 3478.829 kb on - strand, within ECD_03327at 3478.838 kb on + strand, within ECD_03327at 3478.907 kb on + strand, within ECD_03327at 3478.907 kb on + strand, within ECD_03327at 3478.908 kb on - strand, within ECD_03327at 3478.908 kb on - strand, within ECD_03327at 3478.975 kb on + strand, within ECD_03327at 3478.976 kb on - strand, within ECD_03327at 3478.976 kb on - strand, within ECD_03327at 3479.010 kb on + strand, within ECD_03327at 3479.172 kb on - strand, within ECD_03327at 3479.172 kb on - strand, within ECD_03327at 3479.265 kb on + strand, within ECD_03327at 3479.266 kb on - strand, within ECD_03327at 3479.266 kb on - strand, within ECD_03327at 3479.267 kb on + strand, within ECD_03327at 3479.267 kb on + strand, within ECD_03327at 3479.267 kb on + strand, within ECD_03327at 3479.268 kb on - strand, within ECD_03327at 3479.268 kb on - strand, within ECD_03327at 3479.333 kb on + strandat 3479.397 kb on + strandat 3479.398 kb on - strandat 3479.418 kb on + strandat 3479.419 kb on - strandat 3479.422 kb on + strandat 3479.422 kb on + strandat 3479.422 kb on + strandat 3479.423 kb on - strandat 3479.455 kb on - strandat 3479.463 kb on + strandat 3479.464 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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3,476,639 + ECD_03325 0.37 -0.4
3,476,667 - ECD_03325 0.39 -0.3
3,476,784 + ECD_03325 0.47 -0.4
3,476,785 - ECD_03325 0.47 +1.4
3,476,787 + ECD_03325 0.47 +0.3
3,476,797 + ECD_03325 0.47 +1.2
3,476,813 - ECD_03325 0.48 -0.6
3,476,828 + ECD_03325 0.49 +0.2
3,476,924 - ECD_03325 0.55 -0.5
3,476,924 - ECD_03325 0.55 -1.7
3,476,967 - ECD_03325 0.58 +0.4
3,476,967 - ECD_03325 0.58 +0.1
3,477,014 + ECD_03325 0.61 +0.7
3,477,256 + ECD_03325 0.77 -0.9
3,477,257 - ECD_03325 0.77 +0.5
3,477,260 + ECD_03325 0.77 +0.2
3,477,260 + ECD_03325 0.77 -0.1
3,477,260 + ECD_03325 0.77 +0.3
3,477,260 + ECD_03325 0.77 -2.2
3,477,261 - ECD_03325 0.77 -0.2
3,477,320 + ECD_03325 0.81 -0.4
3,477,354 + ECD_03325 0.83 +0.2
3,477,515 - -0.6
3,477,521 + +1.5
3,477,521 + -0.4
3,477,522 - -0.9
3,477,522 - +1.0
3,477,522 - +0.1
3,477,522 - +0.1
3,477,522 - +0.4
3,477,522 - -0.1
3,477,569 + -1.0
3,477,608 - -0.0
3,477,608 - +1.3
3,477,638 + -0.9
3,477,638 + -1.2
3,477,638 + -0.1
3,477,638 + -0.4
3,477,639 - +0.5
3,477,639 - +0.2
3,477,639 - +0.1
3,477,639 - +0.2
3,477,639 - -0.3
3,477,639 - +2.3
3,477,639 - -1.1
3,477,736 + ECD_03326 0.12 +0.2
3,477,817 + ECD_03326 0.20 -0.1
3,477,817 + ECD_03326 0.20 -0.5
3,477,817 + ECD_03326 0.20 -0.6
3,477,904 - ECD_03326 0.30 +1.0
3,477,954 - ECD_03326 0.35 -1.8
3,478,028 + ECD_03326 0.43 +0.3
3,478,105 + ECD_03326 0.51 -1.9
3,478,179 + ECD_03326 0.59 +0.4
3,478,179 + ECD_03326 0.59 -0.1
3,478,194 + ECD_03326 0.60 -0.6
3,478,465 - ECD_03326 0.89 -2.5
3,478,465 - ECD_03326 0.89 -0.6
3,478,465 - ECD_03326 0.89 -0.2
3,478,741 + ECD_03327 0.21 +0.2
3,478,829 - ECD_03327 0.32 +0.2
3,478,838 + ECD_03327 0.33 +0.8
3,478,907 + ECD_03327 0.41 +0.0
3,478,907 + ECD_03327 0.41 +1.4
3,478,908 - ECD_03327 0.41 +0.1
3,478,908 - ECD_03327 0.41 -0.6
3,478,975 + ECD_03327 0.49 -0.6
3,478,976 - ECD_03327 0.49 +2.4
3,478,976 - ECD_03327 0.49 -0.5
3,479,010 + ECD_03327 0.53 +0.0
3,479,172 - ECD_03327 0.73 +0.4
3,479,172 - ECD_03327 0.73 -0.2
3,479,265 + ECD_03327 0.84 -0.9
3,479,266 - ECD_03327 0.84 -0.5
3,479,266 - ECD_03327 0.84 +0.6
3,479,267 + ECD_03327 0.84 -0.6
3,479,267 + ECD_03327 0.84 +2.4
3,479,267 + ECD_03327 0.84 -1.1
3,479,268 - ECD_03327 0.84 -0.3
3,479,268 - ECD_03327 0.84 -1.9
3,479,333 + -0.0
3,479,397 + +0.5
3,479,398 - -0.9
3,479,418 + +0.1
3,479,419 - +0.9
3,479,422 + +1.4
3,479,422 + +2.9
3,479,422 + +0.1
3,479,423 - -0.8
3,479,455 - +1.1
3,479,463 + +0.2
3,479,464 - -0.6

Or see this region's nucleotide sequence