Experiment: NoPhageControl
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02876 and ECD_02877 are separated by 39 nucleotides ECD_02877 and ECD_02878 are separated by 190 nucleotides
ECD_02876: ECD_02876 - L-glyceraldehyde 3-phosphate reductase, at 3,015,334 to 3,016,374
_02876
ECD_02877: ECD_02877 - UPF0114 family putative inner membrane protein, at 3,016,414 to 3,016,908
_02877
ECD_02878: ECD_02878 - putative oxidoreductase, at 3,017,099 to 3,017,983
_02878
Position (kb)
3016
3017 Strain fitness (log2 ratio)
-1
0
1
2 at 3015.483 kb on + strand, within ECD_02876 at 3015.595 kb on + strand, within ECD_02876 at 3015.612 kb on + strand, within ECD_02876 at 3015.613 kb on - strand, within ECD_02876 at 3015.618 kb on + strand, within ECD_02876 at 3015.652 kb on + strand, within ECD_02876 at 3015.653 kb on - strand, within ECD_02876 at 3015.672 kb on + strand, within ECD_02876 at 3015.672 kb on + strand, within ECD_02876 at 3015.672 kb on + strand, within ECD_02876 at 3015.673 kb on - strand, within ECD_02876 at 3015.676 kb on + strand, within ECD_02876 at 3015.677 kb on - strand, within ECD_02876 at 3015.724 kb on + strand, within ECD_02876 at 3015.724 kb on + strand, within ECD_02876 at 3015.724 kb on + strand, within ECD_02876 at 3015.725 kb on - strand, within ECD_02876 at 3015.725 kb on - strand, within ECD_02876 at 3015.725 kb on - strand, within ECD_02876 at 3015.725 kb on - strand, within ECD_02876 at 3015.823 kb on + strand, within ECD_02876 at 3015.842 kb on - strand, within ECD_02876 at 3016.140 kb on - strand, within ECD_02876 at 3016.256 kb on + strand, within ECD_02876 at 3016.256 kb on + strand, within ECD_02876 at 3016.293 kb on + strand at 3016.293 kb on + strand at 3016.294 kb on - strand at 3016.381 kb on - strand at 3016.423 kb on - strand at 3016.445 kb on + strand at 3016.445 kb on + strand at 3016.494 kb on - strand, within ECD_02877 at 3016.494 kb on - strand, within ECD_02877 at 3016.494 kb on - strand, within ECD_02877 at 3016.546 kb on + strand, within ECD_02877 at 3016.677 kb on - strand, within ECD_02877 at 3016.776 kb on + strand, within ECD_02877 at 3016.777 kb on - strand, within ECD_02877 at 3016.795 kb on - strand, within ECD_02877 at 3016.795 kb on - strand, within ECD_02877 at 3016.829 kb on - strand, within ECD_02877 at 3016.851 kb on - strand, within ECD_02877 at 3016.851 kb on - strand, within ECD_02877 at 3016.851 kb on - strand, within ECD_02877 at 3016.880 kb on + strand at 3016.880 kb on + strand at 3016.880 kb on + strand at 3016.880 kb on + strand at 3016.881 kb on - strand at 3016.881 kb on - strand at 3016.881 kb on - strand at 3016.881 kb on - strand at 3016.881 kb on - strand at 3016.881 kb on - strand at 3016.881 kb on - strand at 3016.881 kb on - strand at 3016.881 kb on - strand at 3016.881 kb on - strand at 3016.881 kb on - strand at 3016.881 kb on - strand at 3016.908 kb on + strand at 3016.908 kb on + strand at 3016.909 kb on - strand at 3016.909 kb on - strand at 3016.909 kb on - strand at 3016.909 kb on - strand at 3016.909 kb on - strand at 3016.942 kb on + strand at 3016.942 kb on + strand at 3016.942 kb on + strand at 3016.942 kb on + strand at 3016.942 kb on + strand at 3016.943 kb on - strand at 3016.943 kb on - strand at 3016.943 kb on - strand at 3016.984 kb on + strand at 3016.984 kb on + strand at 3016.984 kb on + strand at 3016.985 kb on - strand at 3016.985 kb on - strand at 3016.985 kb on - strand at 3016.985 kb on - strand at 3016.985 kb on - strand at 3016.987 kb on - strand at 3016.987 kb on - strand at 3016.987 kb on - strand at 3016.987 kb on - strand at 3016.991 kb on + strand at 3017.006 kb on + strand at 3017.019 kb on + strand at 3017.040 kb on + strand at 3017.041 kb on - strand at 3017.061 kb on + strand at 3017.132 kb on + strand at 3017.133 kb on - strand at 3017.133 kb on - strand at 3017.219 kb on + strand, within ECD_02878 at 3017.219 kb on + strand, within ECD_02878 at 3017.219 kb on + strand, within ECD_02878 at 3017.220 kb on - strand, within ECD_02878 at 3017.220 kb on - strand, within ECD_02878 at 3017.248 kb on + strand, within ECD_02878 at 3017.248 kb on + strand, within ECD_02878 at 3017.336 kb on + strand, within ECD_02878 at 3017.337 kb on - strand, within ECD_02878 at 3017.491 kb on + strand, within ECD_02878 at 3017.638 kb on + strand, within ECD_02878 at 3017.638 kb on + strand, within ECD_02878 at 3017.638 kb on + strand, within ECD_02878 at 3017.639 kb on - strand, within ECD_02878 at 3017.639 kb on - strand, within ECD_02878 at 3017.639 kb on - strand, within ECD_02878 at 3017.639 kb on - strand, within ECD_02878 at 3017.666 kb on + strand, within ECD_02878 at 3017.685 kb on + strand, within ECD_02878 at 3017.693 kb on + strand, within ECD_02878 at 3017.694 kb on - strand, within ECD_02878 at 3017.761 kb on + strand, within ECD_02878 at 3017.901 kb on + strand at 3017.901 kb on + strand at 3017.901 kb on + strand at 3017.901 kb on + strand at 3017.901 kb on + strand at 3017.901 kb on + strand at 3017.901 kb on + strand at 3017.901 kb on + strand at 3017.901 kb on + strand at 3017.901 kb on + strand at 3017.902 kb on - strand at 3017.902 kb on - strand at 3017.902 kb on - strand at 3017.902 kb on - strand at 3017.903 kb on + strand at 3017.903 kb on + strand at 3017.903 kb on + strand at 3017.904 kb on - strand at 3017.904 kb on - strand at 3017.904 kb on - strand at 3017.904 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NoPhageControl remove 3,015,483 + ECD_02876 0.14 -0.5 3,015,595 + ECD_02876 0.25 +0.1 3,015,612 + ECD_02876 0.27 +0.3 3,015,613 - ECD_02876 0.27 +0.1 3,015,618 + ECD_02876 0.27 -1.1 3,015,652 + ECD_02876 0.31 -1.3 3,015,653 - ECD_02876 0.31 -0.5 3,015,672 + ECD_02876 0.32 -0.9 3,015,672 + ECD_02876 0.32 +0.3 3,015,672 + ECD_02876 0.32 +0.8 3,015,673 - ECD_02876 0.33 +1.1 3,015,676 + ECD_02876 0.33 +0.9 3,015,677 - ECD_02876 0.33 -0.3 3,015,724 + ECD_02876 0.37 -0.5 3,015,724 + ECD_02876 0.37 -0.6 3,015,724 + ECD_02876 0.37 -0.7 3,015,725 - ECD_02876 0.38 +0.5 3,015,725 - ECD_02876 0.38 +0.3 3,015,725 - ECD_02876 0.38 -0.2 3,015,725 - ECD_02876 0.38 -0.4 3,015,823 + ECD_02876 0.47 +0.2 3,015,842 - ECD_02876 0.49 +0.5 3,016,140 - ECD_02876 0.77 +0.5 3,016,256 + ECD_02876 0.89 +0.3 3,016,256 + ECD_02876 0.89 -0.2 3,016,293 + +0.1 3,016,293 + -1.4 3,016,294 - +0.3 3,016,381 - -0.3 3,016,423 - -0.4 3,016,445 + +0.1 3,016,445 + -0.2 3,016,494 - ECD_02877 0.16 -0.5 3,016,494 - ECD_02877 0.16 +0.3 3,016,494 - ECD_02877 0.16 -0.5 3,016,546 + ECD_02877 0.27 -0.2 3,016,677 - ECD_02877 0.53 -0.2 3,016,776 + ECD_02877 0.73 -0.0 3,016,777 - ECD_02877 0.73 -0.7 3,016,795 - ECD_02877 0.77 -0.3 3,016,795 - ECD_02877 0.77 -0.2 3,016,829 - ECD_02877 0.84 -0.1 3,016,851 - ECD_02877 0.88 -0.9 3,016,851 - ECD_02877 0.88 +0.2 3,016,851 - ECD_02877 0.88 -0.6 3,016,880 + +0.5 3,016,880 + -0.1 3,016,880 + -0.1 3,016,880 + -0.1 3,016,881 - +0.2 3,016,881 - -0.2 3,016,881 - +0.3 3,016,881 - +0.1 3,016,881 - +0.8 3,016,881 - +0.3 3,016,881 - +0.0 3,016,881 - +0.3 3,016,881 - +0.9 3,016,881 - +2.6 3,016,881 - +0.3 3,016,881 - -0.7 3,016,908 + +0.3 3,016,908 + +0.5 3,016,909 - -1.3 3,016,909 - -0.4 3,016,909 - -0.6 3,016,909 - +0.7 3,016,909 - +1.3 3,016,942 + -0.2 3,016,942 + +0.8 3,016,942 + -0.2 3,016,942 + +0.3 3,016,942 + -0.2 3,016,943 - +0.0 3,016,943 - -0.0 3,016,943 - -0.4 3,016,984 + +0.9 3,016,984 + -1.3 3,016,984 + -0.4 3,016,985 - +0.4 3,016,985 - +0.4 3,016,985 - -0.3 3,016,985 - -0.1 3,016,985 - +1.1 3,016,987 - -0.8 3,016,987 - -0.6 3,016,987 - -0.4 3,016,987 - +1.0 3,016,991 + +0.2 3,017,006 + -0.1 3,017,019 + -0.9 3,017,040 + -0.1 3,017,041 - -1.7 3,017,061 + -0.9 3,017,132 + -0.9 3,017,133 - +0.3 3,017,133 - +0.8 3,017,219 + ECD_02878 0.14 +0.7 3,017,219 + ECD_02878 0.14 +0.2 3,017,219 + ECD_02878 0.14 -0.1 3,017,220 - ECD_02878 0.14 +0.4 3,017,220 - ECD_02878 0.14 -0.6 3,017,248 + ECD_02878 0.17 +0.4 3,017,248 + ECD_02878 0.17 +1.1 3,017,336 + ECD_02878 0.27 -1.4 3,017,337 - ECD_02878 0.27 -1.7 3,017,491 + ECD_02878 0.44 +2.3 3,017,638 + ECD_02878 0.61 -1.3 3,017,638 + ECD_02878 0.61 +0.4 3,017,638 + ECD_02878 0.61 +0.3 3,017,639 - ECD_02878 0.61 +0.0 3,017,639 - ECD_02878 0.61 -0.8 3,017,639 - ECD_02878 0.61 -0.2 3,017,639 - ECD_02878 0.61 -0.2 3,017,666 + ECD_02878 0.64 +0.7 3,017,685 + ECD_02878 0.66 -0.0 3,017,693 + ECD_02878 0.67 -0.4 3,017,694 - ECD_02878 0.67 -0.2 3,017,761 + ECD_02878 0.75 +0.6 3,017,901 + -0.2 3,017,901 + +1.2 3,017,901 + -0.2 3,017,901 + -0.4 3,017,901 + -0.3 3,017,901 + -0.8 3,017,901 + -0.3 3,017,901 + +0.4 3,017,901 + +0.5 3,017,901 + -0.6 3,017,902 - +0.4 3,017,902 - -0.2 3,017,902 - -0.0 3,017,902 - -0.2 3,017,903 + +0.1 3,017,903 + +0.1 3,017,903 + +0.1 3,017,904 - -0.4 3,017,904 - -0.9 3,017,904 - +0.1 3,017,904 - +0.3
Or see this region's nucleotide sequence