Experiment: NoPhageControl
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02451 and ECD_02452 overlap by 82 nucleotides ECD_02452 and ECD_02453 are separated by 65 nucleotides ECD_02453 and ECD_02454 are separated by 24 nucleotides ECD_02454 and ECD_02455 are separated by 208 nucleotides
ECD_02451: ECD_02451 - IS1 protein InsA, at 2,563,190 to 2,563,465
_02451
ECD_02452: ECD_02452 - IS1 protein InsB, at 2,563,384 to 2,563,887
_02452
ECD_02453: ECD_02453 - tRNA-specific adenosine deaminase, at 2,563,953 to 2,564,489
_02453
ECD_02454: ECD_02454 - phosphatidylglycerophosphatase C, membrane bound, at 2,564,514 to 2,565,149
_02454
ECD_02455: ECD_02455 - putative DNA-binding transcriptional regulator, at 2,565,358 to 2,566,206
_02455
Position (kb)
2563
2564
2565 Strain fitness (log2 ratio)
-2
-1
0
1 at 2562.958 kb on + strand at 2562.984 kb on - strand at 2564.490 kb on + strand at 2564.490 kb on + strand at 2564.511 kb on - strand at 2564.595 kb on - strand, within ECD_02454 at 2564.831 kb on - strand, within ECD_02454 at 2565.006 kb on + strand, within ECD_02454 at 2565.007 kb on - strand, within ECD_02454 at 2565.034 kb on - strand, within ECD_02454 at 2565.061 kb on - strand, within ECD_02454 at 2565.061 kb on - strand, within ECD_02454 at 2565.087 kb on - strand at 2565.111 kb on + strand at 2565.112 kb on - strand at 2565.154 kb on + strand at 2565.194 kb on + strand at 2565.195 kb on - strand at 2565.195 kb on - strand at 2565.211 kb on - strand at 2565.369 kb on - strand at 2565.437 kb on + strand at 2565.437 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction NoPhageControl remove 2,562,958 + +0.9 2,562,984 - -1.8 2,564,490 + -0.1 2,564,490 + -0.4 2,564,511 - +0.6 2,564,595 - ECD_02454 0.13 +0.1 2,564,831 - ECD_02454 0.50 +0.4 2,565,006 + ECD_02454 0.77 -1.4 2,565,007 - ECD_02454 0.78 +0.7 2,565,034 - ECD_02454 0.82 -0.9 2,565,061 - ECD_02454 0.86 +0.1 2,565,061 - ECD_02454 0.86 -0.6 2,565,087 - +0.1 2,565,111 + -0.3 2,565,112 - +1.3 2,565,154 + -0.9 2,565,194 + -0.1 2,565,195 - -0.0 2,565,195 - +0.8 2,565,211 - +0.4 2,565,369 - -0.7 2,565,437 + +0.2 2,565,437 + +0.7
Or see this region's nucleotide sequence