Strain Fitness in Escherichia coli BL21 around ECD_02425

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02424 and ECD_02425 are separated by 118 nucleotidesECD_02425 and ECD_02426 are separated by 144 nucleotides ECD_02424: ECD_02424 - tRNA mC32,mU32 2'-O-methyltransferase, SAM-dependent, at 2,528,388 to 2,529,128 _02424 ECD_02425: ECD_02425 - inositol monophosphatase, at 2,529,247 to 2,530,050 _02425 ECD_02426: ECD_02426 - putative S9 family prolyl oligopeptidase, at 2,530,195 to 2,531,049 _02426 Position (kb) 2529 2530 2531Strain fitness (log2 ratio) -2 -1 0 1at 2528.402 kb on + strandat 2528.409 kb on - strandat 2528.424 kb on - strandat 2528.424 kb on - strandat 2528.570 kb on - strand, within ECD_02424at 2528.668 kb on + strand, within ECD_02424at 2528.811 kb on - strand, within ECD_02424at 2528.936 kb on + strand, within ECD_02424at 2529.163 kb on + strandat 2529.163 kb on + strandat 2530.028 kb on + strandat 2530.125 kb on - strandat 2530.125 kb on - strandat 2530.265 kb on - strandat 2530.265 kb on - strandat 2530.297 kb on + strand, within ECD_02426at 2530.298 kb on - strand, within ECD_02426at 2530.465 kb on - strand, within ECD_02426at 2530.628 kb on + strand, within ECD_02426at 2530.628 kb on + strand, within ECD_02426at 2530.629 kb on - strand, within ECD_02426at 2530.715 kb on + strand, within ECD_02426at 2530.715 kb on + strand, within ECD_02426at 2530.751 kb on - strand, within ECD_02426at 2530.751 kb on - strand, within ECD_02426at 2530.793 kb on + strand, within ECD_02426at 2530.794 kb on - strand, within ECD_02426at 2530.943 kb on + strand, within ECD_02426at 2531.025 kb on + strandat 2531.048 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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2,528,402 + +0.5
2,528,409 - -0.6
2,528,424 - -0.3
2,528,424 - +0.7
2,528,570 - ECD_02424 0.25 -2.2
2,528,668 + ECD_02424 0.38 -0.9
2,528,811 - ECD_02424 0.57 -0.3
2,528,936 + ECD_02424 0.74 -0.5
2,529,163 + +0.8
2,529,163 + +0.3
2,530,028 + -0.6
2,530,125 - +0.8
2,530,125 - +0.3
2,530,265 - -0.4
2,530,265 - -0.1
2,530,297 + ECD_02426 0.12 +1.1
2,530,298 - ECD_02426 0.12 -0.9
2,530,465 - ECD_02426 0.32 +0.1
2,530,628 + ECD_02426 0.51 +0.0
2,530,628 + ECD_02426 0.51 +0.7
2,530,629 - ECD_02426 0.51 -0.4
2,530,715 + ECD_02426 0.61 -0.6
2,530,715 + ECD_02426 0.61 -0.9
2,530,751 - ECD_02426 0.65 +0.1
2,530,751 - ECD_02426 0.65 +0.6
2,530,793 + ECD_02426 0.70 -0.2
2,530,794 - ECD_02426 0.70 +0.3
2,530,943 + ECD_02426 0.87 +1.1
2,531,025 + -1.1
2,531,048 - -1.0

Or see this region's nucleotide sequence