Strain Fitness in Escherichia coli BL21 around ECD_02418

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02415 and ECD_02416 are separated by 57 nucleotidesECD_02416 and ECD_02417 are separated by 11 nucleotidesECD_02417 and ECD_02418 are separated by 1 nucleotidesECD_02418 and ECD_02419 are separated by 16 nucleotidesECD_02419 and ECD_02420 are separated by 95 nucleotidesECD_02420 and ECD_02421 are separated by 16 nucleotides ECD_02415: ECD_02415 - aminopeptidase B, at 2,521,000 to 2,522,283 _02415 ECD_02416: ECD_02416 - Fe(2+) donor and activity modulator for cysteine desulfurase, at 2,522,341 to 2,522,541 _02416 ECD_02417: ECD_02417 - [2Fe-2S] ferredoxin, at 2,522,553 to 2,522,888 _02417 ECD_02418: ECD_02418 - DnaK-like molecular chaperone specific for IscU, at 2,522,890 to 2,524,740 _02418 ECD_02419: ECD_02419 - HscA co-chaperone, J domain-containing protein Hsc56; IscU-specific chaperone HscAB, at 2,524,757 to 2,525,272 _02419 ECD_02420: ECD_02420 - FeS cluster assembly protein, at 2,525,368 to 2,525,691 _02420 ECD_02421: ECD_02421 - iron-sulfur cluster assembly scaffold protein, at 2,525,708 to 2,526,094 _02421 Position (kb) 2522 2523 2524 2525Strain fitness (log2 ratio) -2 -1 0 1at 2522.052 kb on - strand, within ECD_02415at 2522.202 kb on + strandat 2522.213 kb on + strandat 2522.214 kb on - strandat 2522.286 kb on + strandat 2522.496 kb on - strand, within ECD_02416at 2522.496 kb on - strand, within ECD_02416at 2522.532 kb on + strandat 2522.533 kb on - strandat 2522.533 kb on - strandat 2522.533 kb on - strandat 2522.533 kb on - strandat 2522.533 kb on - strandat 2522.545 kb on - strandat 2522.545 kb on - strandat 2522.545 kb on - strandat 2522.545 kb on - strandat 2522.545 kb on - strandat 2525.732 kb on - strandat 2525.732 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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2,522,052 - ECD_02415 0.82 -0.9
2,522,202 + +0.7
2,522,213 + -0.7
2,522,214 - +0.2
2,522,286 + -1.4
2,522,496 - ECD_02416 0.77 -1.2
2,522,496 - ECD_02416 0.77 +0.5
2,522,532 + -0.1
2,522,533 - -0.7
2,522,533 - +0.4
2,522,533 - +0.8
2,522,533 - +0.2
2,522,533 - -2.6
2,522,545 - -2.2
2,522,545 - +0.9
2,522,545 - -1.2
2,522,545 - +1.1
2,522,545 - -0.9
2,525,732 - -0.2
2,525,732 - +0.4

Or see this region's nucleotide sequence