Experiment: NoPhageControl
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02367 and ECD_02368 are separated by 167 nucleotides ECD_02368 and ECD_02369 are separated by 212 nucleotides
ECD_02367: ECD_02367 - putative neutral zinc metallopeptidase, at 2,460,363 to 2,461,226
_02367
ECD_02368: ECD_02368 - phosphoribosylaminoimidazole-succinocarboxamide synthetase, at 2,461,394 to 2,462,107
_02368
ECD_02369: ECD_02369 - BamABCDE complex OM biogenesis lipoprotein, at 2,462,320 to 2,463,354
_02369
Position (kb)
2461
2462
2463 Strain fitness (log2 ratio)
-2
-1
0
1 at 2460.471 kb on + strand, within ECD_02367 at 2460.578 kb on + strand, within ECD_02367 at 2460.578 kb on + strand, within ECD_02367 at 2460.578 kb on + strand, within ECD_02367 at 2460.579 kb on - strand, within ECD_02367 at 2460.579 kb on - strand, within ECD_02367 at 2460.581 kb on + strand, within ECD_02367 at 2460.581 kb on + strand, within ECD_02367 at 2460.582 kb on - strand, within ECD_02367 at 2460.634 kb on - strand, within ECD_02367 at 2460.634 kb on - strand, within ECD_02367 at 2460.696 kb on + strand, within ECD_02367 at 2460.790 kb on + strand, within ECD_02367 at 2460.790 kb on + strand, within ECD_02367 at 2460.790 kb on + strand, within ECD_02367 at 2460.791 kb on - strand, within ECD_02367 at 2460.890 kb on - strand, within ECD_02367 at 2460.890 kb on - strand, within ECD_02367 at 2460.914 kb on - strand, within ECD_02367 at 2461.079 kb on - strand, within ECD_02367 at 2461.108 kb on - strand, within ECD_02367 at 2461.231 kb on - strand at 2461.231 kb on - strand at 2461.231 kb on - strand at 2461.231 kb on - strand at 2461.241 kb on + strand at 2461.252 kb on + strand at 2461.253 kb on - strand at 2461.335 kb on + strand at 2461.335 kb on + strand at 2461.335 kb on + strand at 2461.407 kb on - strand at 2461.944 kb on + strand, within ECD_02368 at 2462.078 kb on - strand at 2462.085 kb on + strand at 2462.086 kb on - strand at 2462.131 kb on + strand at 2462.315 kb on + strand at 2462.351 kb on - strand at 2462.448 kb on - strand, within ECD_02369 at 2462.516 kb on + strand, within ECD_02369 at 2462.516 kb on + strand, within ECD_02369 at 2462.517 kb on - strand, within ECD_02369 at 2462.743 kb on - strand, within ECD_02369 at 2462.743 kb on - strand, within ECD_02369 at 2462.970 kb on - strand, within ECD_02369 at 2463.013 kb on - strand, within ECD_02369
Per-strain Table
Position Strand Gene LocusTag Fraction NoPhageControl remove 2,460,471 + ECD_02367 0.12 -0.2 2,460,578 + ECD_02367 0.25 -1.1 2,460,578 + ECD_02367 0.25 +0.0 2,460,578 + ECD_02367 0.25 -1.7 2,460,579 - ECD_02367 0.25 -0.8 2,460,579 - ECD_02367 0.25 -0.5 2,460,581 + ECD_02367 0.25 -0.6 2,460,581 + ECD_02367 0.25 -1.7 2,460,582 - ECD_02367 0.25 -1.5 2,460,634 - ECD_02367 0.31 -0.3 2,460,634 - ECD_02367 0.31 -0.2 2,460,696 + ECD_02367 0.39 -0.7 2,460,790 + ECD_02367 0.49 -0.5 2,460,790 + ECD_02367 0.49 -0.1 2,460,790 + ECD_02367 0.49 +0.8 2,460,791 - ECD_02367 0.50 +0.3 2,460,890 - ECD_02367 0.61 -1.2 2,460,890 - ECD_02367 0.61 -1.3 2,460,914 - ECD_02367 0.64 -1.9 2,461,079 - ECD_02367 0.83 +0.3 2,461,108 - ECD_02367 0.86 -0.7 2,461,231 - +0.2 2,461,231 - +0.5 2,461,231 - +0.1 2,461,231 - -0.0 2,461,241 + +0.4 2,461,252 + +0.5 2,461,253 - -0.6 2,461,335 + -0.0 2,461,335 + -0.2 2,461,335 + +0.5 2,461,407 - +0.7 2,461,944 + ECD_02368 0.77 +0.6 2,462,078 - +0.7 2,462,085 + -2.1 2,462,086 - -0.1 2,462,131 + +0.5 2,462,315 + -0.4 2,462,351 - +0.4 2,462,448 - ECD_02369 0.12 +0.4 2,462,516 + ECD_02369 0.19 -0.1 2,462,516 + ECD_02369 0.19 +0.7 2,462,517 - ECD_02369 0.19 -1.1 2,462,743 - ECD_02369 0.41 +0.4 2,462,743 - ECD_02369 0.41 -0.6 2,462,970 - ECD_02369 0.63 -1.3 2,463,013 - ECD_02369 0.67 +0.6
Or see this region's nucleotide sequence