Strain Fitness in Escherichia coli BL21 around ECD_02341

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02339 and ECD_02340 are separated by 9 nucleotidesECD_02340 and ECD_02341 are separated by 20 nucleotidesECD_02341 and ECD_02342 are separated by 11 nucleotides ECD_02339: ECD_02339 - putative ethanol utilization carboxysome structural protein, at 2,426,921 to 2,427,580 _02339 ECD_02340: ECD_02340 - ethanolamine ammonia-lyase, small subunit (light chain), at 2,427,590 to 2,428,477 _02340 ECD_02341: ECD_02341 - ethanolamine ammonia-lyase, large subunit, heavy chain, at 2,428,498 to 2,429,859 _02341 ECD_02342: ECD_02342 - reactivating factor for ethanolamine ammonia lyase, at 2,429,871 to 2,431,274 _02342 Position (kb) 2428 2429 2430Strain fitness (log2 ratio) -2 -1 0 1at 2427.570 kb on - strandat 2427.703 kb on + strand, within ECD_02340at 2427.704 kb on - strand, within ECD_02340at 2427.704 kb on - strand, within ECD_02340at 2427.868 kb on - strand, within ECD_02340at 2427.945 kb on + strand, within ECD_02340at 2427.985 kb on + strand, within ECD_02340at 2427.996 kb on - strand, within ECD_02340at 2428.109 kb on + strand, within ECD_02340at 2428.110 kb on - strand, within ECD_02340at 2428.165 kb on + strand, within ECD_02340at 2428.213 kb on + strand, within ECD_02340at 2428.277 kb on + strand, within ECD_02340at 2428.277 kb on + strand, within ECD_02340at 2428.278 kb on - strand, within ECD_02340at 2428.278 kb on - strand, within ECD_02340at 2428.280 kb on + strand, within ECD_02340at 2428.281 kb on - strand, within ECD_02340at 2428.281 kb on - strand, within ECD_02340at 2428.338 kb on - strand, within ECD_02340at 2428.485 kb on + strandat 2428.486 kb on - strandat 2428.552 kb on - strandat 2428.606 kb on + strandat 2428.607 kb on - strandat 2428.692 kb on - strand, within ECD_02341at 2428.765 kb on - strand, within ECD_02341at 2428.786 kb on - strand, within ECD_02341at 2428.859 kb on + strand, within ECD_02341at 2428.926 kb on - strand, within ECD_02341at 2428.930 kb on - strand, within ECD_02341at 2428.930 kb on - strand, within ECD_02341at 2428.930 kb on - strand, within ECD_02341at 2428.930 kb on - strand, within ECD_02341at 2428.946 kb on - strand, within ECD_02341at 2429.119 kb on - strand, within ECD_02341at 2429.231 kb on + strand, within ECD_02341at 2429.232 kb on - strand, within ECD_02341at 2429.328 kb on - strand, within ECD_02341at 2429.606 kb on + strand, within ECD_02341at 2429.825 kb on + strandat 2429.827 kb on + strandat 2429.827 kb on + strandat 2429.828 kb on - strandat 2429.828 kb on - strandat 2429.851 kb on + strandat 2429.859 kb on + strandat 2429.859 kb on + strandat 2429.933 kb on + strandat 2429.947 kb on + strandat 2430.001 kb on - strandat 2430.167 kb on - strand, within ECD_02342at 2430.279 kb on + strand, within ECD_02342at 2430.280 kb on - strand, within ECD_02342at 2430.372 kb on + strand, within ECD_02342at 2430.373 kb on - strand, within ECD_02342at 2430.373 kb on - strand, within ECD_02342at 2430.373 kb on - strand, within ECD_02342at 2430.469 kb on + strand, within ECD_02342at 2430.796 kb on + strand, within ECD_02342at 2430.796 kb on + strand, within ECD_02342

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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2,427,570 - -0.1
2,427,703 + ECD_02340 0.13 +0.4
2,427,704 - ECD_02340 0.13 +0.4
2,427,704 - ECD_02340 0.13 -0.7
2,427,868 - ECD_02340 0.31 +0.2
2,427,945 + ECD_02340 0.40 +0.1
2,427,985 + ECD_02340 0.44 +0.3
2,427,996 - ECD_02340 0.46 +0.5
2,428,109 + ECD_02340 0.58 +0.5
2,428,110 - ECD_02340 0.59 +0.8
2,428,165 + ECD_02340 0.65 +0.3
2,428,213 + ECD_02340 0.70 -0.9
2,428,277 + ECD_02340 0.77 -0.6
2,428,277 + ECD_02340 0.77 +0.8
2,428,278 - ECD_02340 0.77 -0.4
2,428,278 - ECD_02340 0.77 +1.1
2,428,280 + ECD_02340 0.78 -0.2
2,428,281 - ECD_02340 0.78 -0.9
2,428,281 - ECD_02340 0.78 -0.2
2,428,338 - ECD_02340 0.84 +0.1
2,428,485 + +0.3
2,428,486 - +0.3
2,428,552 - +0.5
2,428,606 + -0.7
2,428,607 - -1.3
2,428,692 - ECD_02341 0.14 +1.1
2,428,765 - ECD_02341 0.20 -0.4
2,428,786 - ECD_02341 0.21 +0.4
2,428,859 + ECD_02341 0.27 -0.1
2,428,926 - ECD_02341 0.31 -0.5
2,428,930 - ECD_02341 0.32 -0.2
2,428,930 - ECD_02341 0.32 +0.3
2,428,930 - ECD_02341 0.32 +1.4
2,428,930 - ECD_02341 0.32 -0.5
2,428,946 - ECD_02341 0.33 +0.5
2,429,119 - ECD_02341 0.46 +1.1
2,429,231 + ECD_02341 0.54 +0.1
2,429,232 - ECD_02341 0.54 -0.6
2,429,328 - ECD_02341 0.61 -1.4
2,429,606 + ECD_02341 0.81 +0.3
2,429,825 + -0.6
2,429,827 + +0.3
2,429,827 + -0.5
2,429,828 - +0.2
2,429,828 - +0.3
2,429,851 + -0.2
2,429,859 + +1.6
2,429,859 + +0.5
2,429,933 + -0.7
2,429,947 + -2.5
2,430,001 - -0.9
2,430,167 - ECD_02342 0.21 +1.4
2,430,279 + ECD_02342 0.29 +0.1
2,430,280 - ECD_02342 0.29 +0.9
2,430,372 + ECD_02342 0.36 +0.8
2,430,373 - ECD_02342 0.36 -0.6
2,430,373 - ECD_02342 0.36 +0.2
2,430,373 - ECD_02342 0.36 +0.6
2,430,469 + ECD_02342 0.43 +0.4
2,430,796 + ECD_02342 0.66 +0.4
2,430,796 + ECD_02342 0.66 -0.0

Or see this region's nucleotide sequence