Strain Fitness in Escherichia coli BL21 around ECD_02239

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02237 and ECD_02238 are separated by 36 nucleotidesECD_02238 and ECD_02239 are separated by 258 nucleotidesECD_02239 and ECD_02240 overlap by 11 nucleotides ECD_02237: ECD_02237 - amidophosphoribosyltransferase, at 2,315,974 to 2,317,491 _02237 ECD_02238: ECD_02238 - colicin V production protein, at 2,317,528 to 2,318,016 _02238 ECD_02239: ECD_02239 - membrane-anchored periplasmic protein involved in septation, at 2,318,275 to 2,318,937 _02239 ECD_02240: ECD_02240 - bifunctional folylpolyglutamate synthase/ dihydrofolate synthase, at 2,318,927 to 2,320,195 _02240 Position (kb) 2318 2319Strain fitness (log2 ratio) -2 -1 0 1 2at 2317.372 kb on - strandat 2317.381 kb on + strandat 2317.382 kb on - strandat 2317.382 kb on - strandat 2317.440 kb on - strandat 2317.462 kb on - strandat 2317.462 kb on - strandat 2317.491 kb on + strandat 2317.530 kb on - strandat 2317.530 kb on - strandat 2317.782 kb on + strand, within ECD_02238at 2317.883 kb on + strand, within ECD_02238at 2317.887 kb on - strand, within ECD_02238at 2317.887 kb on - strand, within ECD_02238at 2318.016 kb on + strandat 2318.017 kb on - strandat 2318.232 kb on - strandat 2318.289 kb on - strandat 2318.422 kb on - strand, within ECD_02239at 2318.422 kb on - strand, within ECD_02239

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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2,317,372 - -0.1
2,317,381 + -2.2
2,317,382 - +0.7
2,317,382 - +0.5
2,317,440 - -1.1
2,317,462 - +0.0
2,317,462 - +0.7
2,317,491 + -0.5
2,317,530 - +1.3
2,317,530 - +0.1
2,317,782 + ECD_02238 0.52 -1.6
2,317,883 + ECD_02238 0.73 +0.1
2,317,887 - ECD_02238 0.73 -0.2
2,317,887 - ECD_02238 0.73 +0.4
2,318,016 + -0.2
2,318,017 - -0.6
2,318,232 - -0.1
2,318,289 - +2.6
2,318,422 - ECD_02239 0.22 +1.3
2,318,422 - ECD_02239 0.22 +0.2

Or see this region's nucleotide sequence