Strain Fitness in Escherichia coli BL21 around ECD_02078

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02077 and ECD_02078 are separated by 15 nucleotides ECD_02077: ECD_02077 - methyl-galactoside transporter subunit, at 2,131,647 to 2,132,657 _02077 ECD_02078: ECD_02078 - methyl-galactoside ABC transporter ATPase, at 2,132,673 to 2,134,193 _02078 Position (kb) 2132 2133 2134 2135Strain fitness (log2 ratio) -1 0 1at 2131.695 kb on - strandat 2131.872 kb on - strand, within ECD_02077at 2132.093 kb on - strand, within ECD_02077at 2132.105 kb on - strand, within ECD_02077at 2132.150 kb on + strand, within ECD_02077at 2132.151 kb on - strand, within ECD_02077at 2133.391 kb on - strand, within ECD_02078at 2134.196 kb on - strandat 2134.528 kb on - strandat 2134.614 kb on - strandat 2134.614 kb on - strandat 2134.651 kb on - strandat 2134.703 kb on - strandat 2134.865 kb on - strandat 2134.865 kb on - strandat 2134.865 kb on - strandat 2134.865 kb on - strandat 2134.865 kb on - strandat 2134.880 kb on - strandat 2135.145 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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2,131,695 - +0.0
2,131,872 - ECD_02077 0.22 +0.9
2,132,093 - ECD_02077 0.44 -0.5
2,132,105 - ECD_02077 0.45 +0.2
2,132,150 + ECD_02077 0.50 +0.2
2,132,151 - ECD_02077 0.50 +0.0
2,133,391 - ECD_02078 0.47 +0.1
2,134,196 - +0.3
2,134,528 - +0.1
2,134,614 - +1.1
2,134,614 - +0.4
2,134,651 - -0.4
2,134,703 - -0.4
2,134,865 - +0.5
2,134,865 - -0.2
2,134,865 - -0.6
2,134,865 - +0.3
2,134,865 - +0.4
2,134,880 - +0.6
2,135,145 - -0.2

Or see this region's nucleotide sequence