Strain Fitness in Escherichia coli BL21 around ECD_01942

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01940 and ECD_01941 overlap by 4 nucleotidesECD_01941 and ECD_01942 are separated by 142 nucleotidesECD_01942 and ECD_01943 are separated by 9 nucleotides ECD_01940: ECD_01940 - putative glycosyltransferase WbbA, at 2,004,749 to 2,005,495 _01940 ECD_01941: ECD_01941 - VioB, involved in dTDP-N-acetylviosamine synthesis, at 2,005,492 to 2,005,929 _01941 ECD_01942: ECD_01942 - VioA, involved in dTDP-N-acetylviosamine synthesis, at 2,006,072 to 2,007,184 _01942 ECD_01943: ECD_01943 - O antigen translocase (Wzx), at 2,007,194 to 2,008,621 _01943 Position (kb) 2006 2007 2008Strain fitness (log2 ratio) -1 0 1at 2005.691 kb on - strand, within ECD_01941

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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2,005,691 - ECD_01941 0.45 +0.1

Or see this region's nucleotide sequence