Strain Fitness in Escherichia coli BL21 around ECD_01869

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01868 and ECD_01869 are separated by 69 nucleotidesECD_01869 and ECD_01870 are separated by 796 nucleotides ECD_01868: ECD_01868 - L-arabinose ABC transporter ATPase, at 1,928,697 to 1,930,211 _01868 ECD_01869: ECD_01869 - L-arabinose ABC transporter periplasmic binding protein, at 1,930,281 to 1,931,270 _01869 ECD_01870: ECD_01870 - ferritin B, putative ferrous iron reservoir, at 1,932,067 to 1,932,570 _01870 Position (kb) 1930 1931 1932Strain fitness (log2 ratio) -2 -1 0 1at 1929.387 kb on + strand, within ECD_01868at 1929.550 kb on + strand, within ECD_01868at 1929.619 kb on + strand, within ECD_01868at 1929.622 kb on - strand, within ECD_01868at 1930.133 kb on + strandat 1930.341 kb on + strandat 1930.418 kb on + strand, within ECD_01869at 1930.429 kb on - strand, within ECD_01869at 1930.479 kb on - strand, within ECD_01869at 1930.836 kb on - strand, within ECD_01869at 1930.836 kb on - strand, within ECD_01869at 1930.837 kb on + strand, within ECD_01869at 1931.010 kb on - strand, within ECD_01869at 1931.368 kb on + strandat 1931.404 kb on - strandat 1931.478 kb on + strandat 1932.059 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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1,929,387 + ECD_01868 0.46 +0.1
1,929,550 + ECD_01868 0.56 -0.1
1,929,619 + ECD_01868 0.61 -0.4
1,929,622 - ECD_01868 0.61 -0.3
1,930,133 + -1.0
1,930,341 + +0.8
1,930,418 + ECD_01869 0.14 -0.6
1,930,429 - ECD_01869 0.15 -0.6
1,930,479 - ECD_01869 0.20 -0.3
1,930,836 - ECD_01869 0.56 -1.4
1,930,836 - ECD_01869 0.56 +0.1
1,930,837 + ECD_01869 0.56 -0.8
1,931,010 - ECD_01869 0.74 -1.9
1,931,368 + -0.7
1,931,404 - -1.2
1,931,478 + +0.8
1,932,059 + -0.6

Or see this region's nucleotide sequence