Strain Fitness in Escherichia coli BL21 around ECD_01767

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01764 and ECD_01765 are separated by 147 nucleotidesECD_01765 and ECD_01766 are separated by 3 nucleotidesECD_01766 and ECD_01767 are separated by 78 nucleotidesECD_01767 and ECD_01768 are separated by 465 nucleotides ECD_01764: ECD_01764 - UPF0410 family protein, at 1,823,384 to 1,823,632 _01764 ECD_01765: ECD_01765 - uncharacterized protein, at 1,823,780 to 1,823,962 _01765 ECD_01766: ECD_01766 - DUF1971 family protein, nitrate-inducible, at 1,823,966 to 1,824,190 _01766 ECD_01767: ECD_01767 - putative transposase insL for insertion sequence IS186, at 1,824,269 to 1,825,381 _01767 ECD_01768: ECD_01768 - leucine efflux protein, at 1,825,847 to 1,826,485 _01768 Position (kb) 1824 1825 1826Strain fitness (log2 ratio) -1 0 1at 1823.474 kb on - strand, within ECD_01764at 1823.947 kb on - strandat 1823.947 kb on - strandat 1825.941 kb on - strand, within ECD_01768

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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1,823,474 - ECD_01764 0.36 +0.8
1,823,947 - +0.2
1,823,947 - +1.1
1,825,941 - ECD_01768 0.15 +0.7

Or see this region's nucleotide sequence