Strain Fitness in Escherichia coli BL21 around ECD_01419

Experiment: NoPhageControl

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntECD_01418 and ECD_01419 are separated by 32 nucleotidesECD_01419 and ECD_01420 are separated by 3 nucleotidesECD_01420 and ECD_01421 are separated by 172 nucleotides ECD_01418: ECD_01418 - H repeat-associated putative transposase, at 1,487,908 to 1,488,699 _01418 ECD_01419: ECD_01419 - 4-oxalocrotonate tautomerase, at 1,488,732 to 1,488,959 _01419 ECD_01420: ECD_01420 - flavin reductase like-protein, at 1,488,963 to 1,489,532 _01420 ECD_01421: ECD_01421 - N-hydroxyarylamine O-acetyltransferase, at 1,489,705 to 1,490,550 _01421 Position (kb) 1488 1489Strain fitness (log2 ratio) -1 0 1at 1489.673 kb on + strandat 1489.741 kb on - strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
remove
1,489,673 + -0.2
1,489,741 - -0.6

Or see this region's nucleotide sequence