Strain Fitness in Escherichia coli BL21 around ECD_01212

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01211 and ECD_01212 are separated by 201 nucleotidesECD_01212 and ECD_01213 are separated by 143 nucleotides ECD_01211: ECD_01211 - PcnB-degradosome interaction factor; response regulator, at 1,278,034 to 1,279,047 _01211 ECD_01212: ECD_01212 - glucose-1-phosphate uridylyltransferase, at 1,279,249 to 1,280,157 _01212 ECD_01213: ECD_01213 - global DNA-binding transcriptional dual regulator H-NS, at 1,280,301 to 1,280,714 _01213 Position (kb) 1279 1280 1281Strain fitness (log2 ratio) -1 0 1 2at 1278.251 kb on + strand, within ECD_01211at 1278.255 kb on + strand, within ECD_01211at 1278.944 kb on + strand, within ECD_01211at 1278.944 kb on + strand, within ECD_01211at 1279.103 kb on + strandat 1279.185 kb on + strandat 1279.186 kb on - strandat 1280.420 kb on - strand, within ECD_01213at 1280.735 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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1,278,251 + ECD_01211 0.21 -0.1
1,278,255 + ECD_01211 0.22 -1.2
1,278,944 + ECD_01211 0.90 -1.3
1,278,944 + ECD_01211 0.90 +1.1
1,279,103 + -0.7
1,279,185 + +0.2
1,279,186 - +0.9
1,280,420 - ECD_01213 0.29 +2.6
1,280,735 - +1.6

Or see this region's nucleotide sequence