Strain Fitness in Escherichia coli BL21 around ECD_01184

Experiment: NoPhageControl

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntECD_01183 and ECD_01184 overlap by 1 nucleotidesECD_01184 and ECD_01185 are separated by 213 nucleotides ECD_01183: ECD_01183 - 4-diphosphocytidyl-2-C-methylerythritol kinase, at 1,250,174 to 1,251,025 _01183 ECD_01184: ECD_01184 - lipoprotein localization factor, at 1,251,025 to 1,251,648 _01184 ECD_01185: ECD_01185 - glutamyl tRNA reductase, at 1,251,862 to 1,253,118 _01185 Position (kb) 1251 1252Strain fitness (log2 ratio) -2 -1 0 1at 1251.671 kb on - strandat 1251.691 kb on - strandat 1251.827 kb on + strandat 1251.827 kb on + strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
remove
1,251,671 - -1.9
1,251,691 - +0.9
1,251,827 + +0.5
1,251,827 + +0.4

Or see this region's nucleotide sequence