Strain Fitness in Escherichia coli BL21 around ECD_01090

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01088 and ECD_01089 are separated by 12 nucleotidesECD_01089 and ECD_01090 are separated by 210 nucleotidesECD_01090 and ECD_01091 are separated by 87 nucleotides ECD_01088: ECD_01088 - malonyl-CoA-[acyl-carrier-protein] transacylase, at 1,152,295 to 1,153,224 _01088 ECD_01089: ECD_01089 - 3-oxoacyl-[acyl-carrier-protein] reductase, at 1,153,237 to 1,153,971 _01089 ECD_01090: ECD_01090 - acyl carrier protein (ACP), at 1,154,182 to 1,154,418 _01090 ECD_01091: ECD_01091 - 3-oxoacyl-[acyl-carrier-protein] synthase II, at 1,154,506 to 1,155,747 _01091 Position (kb) 1154 1155Strain fitness (log2 ratio) -3 -2 -1 0 1at 1154.027 kb on - strandat 1154.031 kb on - strandat 1154.078 kb on + strandat 1154.457 kb on + strandat 1154.473 kb on + strandat 1154.522 kb on + strandat 1154.691 kb on + strand, within ECD_01091at 1154.956 kb on + strand, within ECD_01091

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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1,154,027 - -3.4
1,154,031 - -1.7
1,154,078 + -0.3
1,154,457 + -1.4
1,154,473 + +0.2
1,154,522 + -0.5
1,154,691 + ECD_01091 0.15 -3.0
1,154,956 + ECD_01091 0.36 -1.7

Or see this region's nucleotide sequence