Experiment: NoPhageControl
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00913 and ECD_00914 are separated by 172 nucleotides ECD_00914 and ECD_00915 are separated by 110 nucleotides ECD_00915 and ECD_00916 are separated by 159 nucleotides ECD_00916 and ECD_00917 are separated by 207 nucleotides
ECD_00913: ECD_00913 - putative peptidase-related chaperone, at 965,354 to 966,118
_00913
ECD_00914: ECD_00914 - cytidylate kinase, at 966,291 to 966,974
_00914
ECD_00915: ECD_00915 - 30S ribosomal subunit protein S1, at 967,085 to 968,758
_00915
ECD_00916: ECD_00916 - integration host factor (IHF), DNA-binding protein, beta subunit, at 968,918 to 969,202
_00916
ECD_00917: ECD_00917 - ComEC family inner membrane protein, at 969,410 to 971,674
_00917
Position (kb) 967
968
969 Strain fitness (log2 ratio) -1
0
1 at 966.241 kb on + strand at 966.267 kb on + strand at 966.267 kb on + strand at 968.802 kb on + strand at 968.863 kb on + strand at 969.143 kb on + strand, within ECD_00916 at 969.433 kb on - strand at 969.433 kb on - strand at 969.433 kb on - strand at 969.439 kb on - strand at 969.533 kb on - strand at 969.592 kb on - strand at 969.727 kb on - strand, within ECD_00917
Per-strain Table
Position Strand Gene LocusTag Fraction NoPhageControl remove 966,241 + +0.7 966,267 + -0.1 966,267 + +0.4 968,802 + -0.7 968,863 + -0.9 969,143 + ECD_00916 0.79 -0.4 969,433 - +0.3 969,433 - +0.4 969,433 - +1.5 969,439 - +0.5 969,533 - -0.0 969,592 - -0.5 969,727 - ECD_00917 0.14 -0.3
Or see this region's nucleotide sequence