Strain Fitness in Escherichia coli BL21 around ECD_00903

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_00902 and ECD_00903 are separated by 209 nucleotidesECD_00903 and ECD_00904 are separated by 0 nucleotides ECD_00902: ECD_00902 - putative MFS transporter, inner membrane protein, at 950,962 to 952,110 _00902 ECD_00903: ECD_00903 - putative transporter, at 952,320 to 953,750 _00903 ECD_00904: ECD_00904 - LysR family putative transcriptional regulator, at 953,751 to 954,659 _00904 Position (kb) 952 953 954Strain fitness (log2 ratio) -2 -1 0 1 2at 951.364 kb on + strand, within ECD_00902at 951.364 kb on + strand, within ECD_00902at 951.364 kb on + strand, within ECD_00902at 951.365 kb on - strand, within ECD_00902at 951.379 kb on + strand, within ECD_00902at 951.379 kb on + strand, within ECD_00902at 951.617 kb on + strand, within ECD_00902at 951.618 kb on - strand, within ECD_00902at 951.867 kb on - strand, within ECD_00902at 952.712 kb on - strand, within ECD_00903at 952.808 kb on + strand, within ECD_00903at 953.745 kb on - strandat 953.833 kb on + strandat 953.833 kb on + strandat 953.833 kb on + strandat 953.833 kb on + strandat 954.165 kb on + strand, within ECD_00904at 954.545 kb on + strand, within ECD_00904

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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951,364 + ECD_00902 0.35 +1.9
951,364 + ECD_00902 0.35 -2.5
951,364 + ECD_00902 0.35 +1.2
951,365 - ECD_00902 0.35 -0.0
951,379 + ECD_00902 0.36 -0.5
951,379 + ECD_00902 0.36 -0.6
951,617 + ECD_00902 0.57 -2.2
951,618 - ECD_00902 0.57 +0.1
951,867 - ECD_00902 0.79 +1.2
952,712 - ECD_00903 0.27 -0.7
952,808 + ECD_00903 0.34 +0.3
953,745 - +1.2
953,833 + +0.2
953,833 + -1.4
953,833 + +0.8
953,833 + +0.4
954,165 + ECD_00904 0.46 +0.3
954,545 + ECD_00904 0.87 -1.3

Or see this region's nucleotide sequence