Strain Fitness in Escherichia coli BL21 around ECD_00685

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_00684 and ECD_00685 are separated by 300 nucleotidesECD_00685 and ECD_00686 are separated by 14 nucleotides ECD_00684: ECD_00684 - succinate dehydrogenase, FeS subunit, at 716,259 to 716,975 _00684 ECD_00685: ECD_00685 - 2-oxoglutarate decarboxylase, thiamine triphosphate-binding, at 717,276 to 720,077 _00685 ECD_00686: ECD_00686 - dihydrolipoyltranssuccinase, at 720,092 to 721,309 _00686 Position (kb) 717 718 719 720 721Strain fitness (log2 ratio) -1 0 1 2at 716.483 kb on + strand, within ECD_00684at 716.616 kb on + strand, within ECD_00684at 716.616 kb on + strand, within ECD_00684at 716.705 kb on + strand, within ECD_00684at 716.705 kb on + strand, within ECD_00684at 716.902 kb on + strand, within ECD_00684at 716.902 kb on + strand, within ECD_00684at 717.141 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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716,483 + ECD_00684 0.31 +0.9
716,616 + ECD_00684 0.50 +2.7
716,616 + ECD_00684 0.50 -0.8
716,705 + ECD_00684 0.62 +0.6
716,705 + ECD_00684 0.62 +1.5
716,902 + ECD_00684 0.90 +1.1
716,902 + ECD_00684 0.90 +0.5
717,141 + +0.4

Or see this region's nucleotide sequence