Strain Fitness in Escherichia coli BL21 around ECD_00679

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_00678 and ECD_00679 are separated by 59 nucleotidesECD_00679 and ECD_00680 are separated by 389 nucleotides ECD_00678: ECD_00678 - putative outer membrane protein, at 708,289 to 710,739 _00678 ECD_00679: ECD_00679 - putative fimbrial-like adhesin protein, at 710,799 to 711,365 _00679 ECD_00680: ECD_00680 - citrate synthase, at 711,755 to 713,038 _00680 Position (kb) 710 711 712Strain fitness (log2 ratio) -2 -1 0 1at 709.999 kb on - strand, within ECD_00678at 710.001 kb on - strand, within ECD_00678at 710.051 kb on - strand, within ECD_00678at 710.062 kb on + strand, within ECD_00678at 710.142 kb on + strand, within ECD_00678at 710.241 kb on - strand, within ECD_00678at 710.262 kb on - strand, within ECD_00678at 710.355 kb on + strand, within ECD_00678at 710.858 kb on + strand, within ECD_00679at 711.800 kb on - strandat 711.801 kb on + strandat 711.829 kb on + strandat 711.875 kb on - strandat 712.157 kb on - strand, within ECD_00680at 712.319 kb on - strand, within ECD_00680

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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709,999 - ECD_00678 0.70 -0.1
710,001 - ECD_00678 0.70 +0.3
710,051 - ECD_00678 0.72 +1.1
710,062 + ECD_00678 0.72 -1.1
710,142 + ECD_00678 0.76 -0.7
710,241 - ECD_00678 0.80 +1.0
710,262 - ECD_00678 0.80 +0.6
710,355 + ECD_00678 0.84 -1.9
710,858 + ECD_00679 0.10 +0.5
711,800 - +0.4
711,801 + -0.2
711,829 + +0.4
711,875 - +0.4
712,157 - ECD_00680 0.31 -0.9
712,319 - ECD_00680 0.44 +0.4

Or see this region's nucleotide sequence