Experiment: NoPhageControl
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00393 and ECD_00394 are separated by 150 nucleotides ECD_00394 and ECD_00395 are separated by 105 nucleotides ECD_00395 and ECD_00396 are separated by 51 nucleotides ECD_00396 and ECD_00397 are separated by 64 nucleotides
ECD_00393: ECD_00393 - periplasmic folding chaperone, has an inactive PPIase domain, at 430,949 to 432,820
_00393
ECD_00394: ECD_00394 - putative competence-suppressing periplasmic helix-hairpin-helix DNA-binding protein, at 432,971 to 433,342
_00394
ECD_00395: ECD_00395 - long-chain acyl-CoA thioesterase III, at 433,448 to 433,846
_00395
ECD_00396: ECD_00396 - 7-cyano-7-deazaguanine (preQ0) synthase; queuosine biosynthesis, at 433,898 to 434,593
_00396
ECD_00397: ECD_00397 - putative ABC transporter periplasmic binding protein, at 434,658 to 436,358
_00397
Position (kb) 433
434 Strain fitness (log2 ratio) -2
-1
0
1 at 432.818 kb on + strand at 432.949 kb on + strand at 432.985 kb on + strand at 432.986 kb on - strand at 433.075 kb on - strand, within ECD_00394 at 433.120 kb on - strand, within ECD_00394 at 433.165 kb on + strand, within ECD_00394 at 433.165 kb on + strand, within ECD_00394 at 433.238 kb on + strand, within ECD_00394 at 433.251 kb on - strand, within ECD_00394 at 433.404 kb on + strand at 433.404 kb on + strand at 433.408 kb on + strand at 433.408 kb on + strand at 433.409 kb on - strand at 433.409 kb on - strand at 433.409 kb on - strand at 433.411 kb on - strand at 433.420 kb on + strand at 433.420 kb on + strand at 433.420 kb on + strand at 433.422 kb on + strand at 433.433 kb on + strand at 433.433 kb on + strand at 433.434 kb on - strand at 433.491 kb on - strand, within ECD_00395 at 433.621 kb on + strand, within ECD_00395 at 433.621 kb on + strand, within ECD_00395 at 433.621 kb on + strand, within ECD_00395 at 433.621 kb on + strand, within ECD_00395 at 433.621 kb on + strand, within ECD_00395 at 433.621 kb on + strand, within ECD_00395 at 433.622 kb on - strand, within ECD_00395 at 433.622 kb on - strand, within ECD_00395 at 433.622 kb on - strand, within ECD_00395 at 433.622 kb on - strand, within ECD_00395 at 433.657 kb on - strand, within ECD_00395 at 433.660 kb on + strand, within ECD_00395 at 433.661 kb on - strand, within ECD_00395 at 433.661 kb on - strand, within ECD_00395 at 433.664 kb on - strand, within ECD_00395 at 433.664 kb on - strand, within ECD_00395 at 433.704 kb on + strand, within ECD_00395 at 433.717 kb on + strand, within ECD_00395 at 433.780 kb on + strand, within ECD_00395 at 433.900 kb on - strand at 433.956 kb on + strand at 433.956 kb on + strand at 434.029 kb on - strand, within ECD_00396 at 434.265 kb on + strand, within ECD_00396 at 434.265 kb on + strand, within ECD_00396 at 434.265 kb on + strand, within ECD_00396 at 434.265 kb on + strand, within ECD_00396 at 434.265 kb on + strand, within ECD_00396 at 434.266 kb on - strand, within ECD_00396 at 434.266 kb on - strand, within ECD_00396 at 434.266 kb on - strand, within ECD_00396 at 434.266 kb on - strand, within ECD_00396 at 434.267 kb on + strand, within ECD_00396 at 434.294 kb on - strand, within ECD_00396 at 434.294 kb on - strand, within ECD_00396 at 434.406 kb on - strand, within ECD_00396 at 434.406 kb on - strand, within ECD_00396 at 434.419 kb on + strand, within ECD_00396 at 434.520 kb on + strand, within ECD_00396 at 434.521 kb on - strand, within ECD_00396 at 434.521 kb on - strand, within ECD_00396 at 434.529 kb on - strand at 434.529 kb on - strand at 434.655 kb on + strand at 434.656 kb on - strand at 434.748 kb on - strand at 434.796 kb on + strand at 434.826 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NoPhageControl remove 432,818 + +0.3 432,949 + +0.7 432,985 + -0.0 432,986 - +1.2 433,075 - ECD_00394 0.28 -0.1 433,120 - ECD_00394 0.40 +0.2 433,165 + ECD_00394 0.52 +0.7 433,165 + ECD_00394 0.52 -0.6 433,238 + ECD_00394 0.72 +0.1 433,251 - ECD_00394 0.75 +0.1 433,404 + -0.6 433,404 + -0.2 433,408 + -0.9 433,408 + +1.0 433,409 - -0.6 433,409 - +0.3 433,409 - +0.5 433,411 - -0.3 433,420 + +0.2 433,420 + +0.6 433,420 + -0.3 433,422 + +0.7 433,433 + +0.7 433,433 + -0.5 433,434 - +0.3 433,491 - ECD_00395 0.11 -0.4 433,621 + ECD_00395 0.43 -1.8 433,621 + ECD_00395 0.43 -0.3 433,621 + ECD_00395 0.43 -0.6 433,621 + ECD_00395 0.43 -0.2 433,621 + ECD_00395 0.43 +0.1 433,621 + ECD_00395 0.43 +0.3 433,622 - ECD_00395 0.44 -0.4 433,622 - ECD_00395 0.44 -1.3 433,622 - ECD_00395 0.44 -0.9 433,622 - ECD_00395 0.44 -0.1 433,657 - ECD_00395 0.52 -0.6 433,660 + ECD_00395 0.53 -1.0 433,661 - ECD_00395 0.53 -0.1 433,661 - ECD_00395 0.53 +0.4 433,664 - ECD_00395 0.54 +0.5 433,664 - ECD_00395 0.54 +1.0 433,704 + ECD_00395 0.64 -0.2 433,717 + ECD_00395 0.67 -0.3 433,780 + ECD_00395 0.83 -0.2 433,900 - -0.4 433,956 + -0.0 433,956 + -1.6 434,029 - ECD_00396 0.19 +0.7 434,265 + ECD_00396 0.53 +1.1 434,265 + ECD_00396 0.53 -0.8 434,265 + ECD_00396 0.53 +0.9 434,265 + ECD_00396 0.53 +1.1 434,265 + ECD_00396 0.53 +0.1 434,266 - ECD_00396 0.53 +0.7 434,266 - ECD_00396 0.53 +0.1 434,266 - ECD_00396 0.53 +0.5 434,266 - ECD_00396 0.53 -0.8 434,267 + ECD_00396 0.53 +0.7 434,294 - ECD_00396 0.57 -0.7 434,294 - ECD_00396 0.57 -0.0 434,406 - ECD_00396 0.73 +0.9 434,406 - ECD_00396 0.73 -0.3 434,419 + ECD_00396 0.75 -0.6 434,520 + ECD_00396 0.89 +0.8 434,521 - ECD_00396 0.90 -0.1 434,521 - ECD_00396 0.90 -0.4 434,529 - +0.2 434,529 - +0.5 434,655 + -0.0 434,656 - +1.0 434,748 - +1.6 434,796 + +1.2 434,826 - +0.4
Or see this region's nucleotide sequence