Strain Fitness in Escherichia coli BL21 around ECD_00103

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_00101 and ECD_00102 are separated by 9 nucleotidesECD_00102 and ECD_00103 overlap by 1 nucleotidesECD_00103 and ECD_00104 are separated by 224 nucleotides ECD_00101: ECD_00101 - DNA gyrase inhibitor, at 114,454 to 114,651 _00101 ECD_00102: ECD_00102 - FtsZ stabilizer, at 114,661 to 115,404 _00102 ECD_00103: ECD_00103 - dephospho-CoA kinase, at 115,404 to 116,024 _00103 ECD_00104: ECD_00104 - GMP reductase, at 116,249 to 117,292 _00104 Position (kb) 115 116 117Strain fitness (log2 ratio) -1 0 1 2at 114.432 kb on + strandat 114.433 kb on - strandat 114.640 kb on - strandat 114.640 kb on - strandat 114.640 kb on - strandat 114.663 kb on - strandat 114.663 kb on - strandat 114.751 kb on - strand, within ECD_00102at 114.751 kb on - strand, within ECD_00102at 114.751 kb on - strand, within ECD_00102at 114.751 kb on - strand, within ECD_00102at 114.900 kb on + strand, within ECD_00102at 114.900 kb on + strand, within ECD_00102at 114.901 kb on - strand, within ECD_00102at 114.901 kb on - strand, within ECD_00102at 114.901 kb on - strand, within ECD_00102at 114.901 kb on - strand, within ECD_00102at 114.944 kb on - strand, within ECD_00102at 114.998 kb on - strand, within ECD_00102at 115.100 kb on - strand, within ECD_00102at 115.102 kb on + strand, within ECD_00102at 115.143 kb on + strand, within ECD_00102at 115.189 kb on - strand, within ECD_00102at 115.357 kb on - strandat 115.357 kb on - strandat 115.357 kb on - strandat 115.373 kb on - strandat 116.014 kb on - strandat 116.014 kb on - strandat 116.014 kb on - strandat 116.014 kb on - strandat 116.014 kb on - strandat 116.114 kb on + strandat 116.128 kb on - strandat 116.187 kb on + strandat 116.188 kb on - strandat 116.223 kb on + strandat 116.223 kb on + strandat 116.223 kb on + strandat 116.224 kb on - strandat 116.255 kb on - strandat 116.484 kb on - strand, within ECD_00104at 116.629 kb on + strand, within ECD_00104at 116.724 kb on + strand, within ECD_00104at 116.724 kb on + strand, within ECD_00104at 116.724 kb on + strand, within ECD_00104at 116.724 kb on + strand, within ECD_00104at 116.724 kb on + strand, within ECD_00104at 116.725 kb on - strand, within ECD_00104at 116.725 kb on - strand, within ECD_00104at 116.806 kb on + strand, within ECD_00104at 116.806 kb on + strand, within ECD_00104

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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114,432 + -0.9
114,433 - +0.5
114,640 - +1.7
114,640 - +0.6
114,640 - +0.0
114,663 - +0.1
114,663 - +0.0
114,751 - ECD_00102 0.12 -0.3
114,751 - ECD_00102 0.12 +0.3
114,751 - ECD_00102 0.12 -0.1
114,751 - ECD_00102 0.12 +0.1
114,900 + ECD_00102 0.32 -0.3
114,900 + ECD_00102 0.32 -0.7
114,901 - ECD_00102 0.32 +0.2
114,901 - ECD_00102 0.32 -0.5
114,901 - ECD_00102 0.32 +0.6
114,901 - ECD_00102 0.32 +0.0
114,944 - ECD_00102 0.38 -0.4
114,998 - ECD_00102 0.45 -0.7
115,100 - ECD_00102 0.59 +1.1
115,102 + ECD_00102 0.59 -0.8
115,143 + ECD_00102 0.65 +1.8
115,189 - ECD_00102 0.71 +0.8
115,357 - +0.1
115,357 - -0.3
115,357 - -0.4
115,373 - -0.8
116,014 - -0.2
116,014 - +0.5
116,014 - -0.1
116,014 - -0.8
116,014 - +0.1
116,114 + -1.2
116,128 - +0.3
116,187 + +0.6
116,188 - +0.0
116,223 + -0.3
116,223 + +0.3
116,223 + +0.3
116,224 - +1.0
116,255 - +0.0
116,484 - ECD_00104 0.23 -1.0
116,629 + ECD_00104 0.36 -0.2
116,724 + ECD_00104 0.45 +0.0
116,724 + ECD_00104 0.45 +0.1
116,724 + ECD_00104 0.45 -0.3
116,724 + ECD_00104 0.45 +1.0
116,724 + ECD_00104 0.45 +0.1
116,725 - ECD_00104 0.46 +1.2
116,725 - ECD_00104 0.46 -0.1
116,806 + ECD_00104 0.53 -0.0
116,806 + ECD_00104 0.53 -0.8

Or see this region's nucleotide sequence