Experiment: D-Arabinose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS22595 and ABID97_RS22600 overlap by 4 nucleotides ABID97_RS22600 and ABID97_RS22605 are separated by 18 nucleotides ABID97_RS22605 and ABID97_RS22610 are separated by 44 nucleotides ABID97_RS22610 and ABID97_RS22615 are separated by 12 nucleotides
ABID97_RS22595: ABID97_RS22595 - 3',5'-nucleoside bisphosphate phosphatase, at 4,679,299 to 4,680,156
_RS22595
ABID97_RS22600: ABID97_RS22600 - DMT family transporter, at 4,680,153 to 4,681,130
_RS22600
ABID97_RS22605: ABID97_RS22605 - L-threonylcarbamoyladenylate synthase, at 4,681,149 to 4,681,784
_RS22605
ABID97_RS22610: ABID97_RS22610 - site-2 protease family protein, at 4,681,829 to 4,682,500
_RS22610
ABID97_RS22615: ABID97_RS22615 - tryptophan--tRNA ligase, at 4,682,513 to 4,683,841
_RS22615
Position (kb) 4681
4682 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 4680.321 kb on - strand, within ABID97_RS22600 at 4680.369 kb on + strand, within ABID97_RS22600 at 4680.513 kb on + strand, within ABID97_RS22600 at 4680.514 kb on - strand, within ABID97_RS22600 at 4680.514 kb on - strand, within ABID97_RS22600 at 4680.597 kb on + strand, within ABID97_RS22600 at 4680.597 kb on + strand, within ABID97_RS22600 at 4680.597 kb on + strand, within ABID97_RS22600 at 4680.597 kb on + strand, within ABID97_RS22600 at 4680.960 kb on + strand, within ABID97_RS22600 at 4680.967 kb on - strand, within ABID97_RS22600 at 4681.260 kb on + strand, within ABID97_RS22605 at 4681.261 kb on - strand, within ABID97_RS22605 at 4681.380 kb on + strand, within ABID97_RS22605 at 4681.381 kb on - strand, within ABID97_RS22605 at 4681.381 kb on - strand, within ABID97_RS22605 at 4681.404 kb on + strand, within ABID97_RS22605 at 4681.438 kb on - strand, within ABID97_RS22605 at 4681.848 kb on + strand at 4681.857 kb on + strand at 4681.858 kb on - strand at 4681.861 kb on + strand at 4681.861 kb on + strand at 4681.865 kb on + strand at 4682.278 kb on - strand, within ABID97_RS22610 at 4682.450 kb on + strand at 4682.493 kb on + strand at 4682.494 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Arabinose (C) remove 4,680,321 - ABID97_RS22600 0.17 +2.0 4,680,369 + ABID97_RS22600 0.22 -1.2 4,680,513 + ABID97_RS22600 0.37 -1.7 4,680,514 - ABID97_RS22600 0.37 +0.9 4,680,514 - ABID97_RS22600 0.37 +0.9 4,680,597 + ABID97_RS22600 0.45 -0.6 4,680,597 + ABID97_RS22600 0.45 +1.3 4,680,597 + ABID97_RS22600 0.45 -1.5 4,680,597 + ABID97_RS22600 0.45 +1.3 4,680,960 + ABID97_RS22600 0.83 -0.1 4,680,967 - ABID97_RS22600 0.83 +1.0 4,681,260 + ABID97_RS22605 0.17 +0.7 4,681,261 - ABID97_RS22605 0.18 +1.3 4,681,380 + ABID97_RS22605 0.36 -0.5 4,681,381 - ABID97_RS22605 0.36 +1.5 4,681,381 - ABID97_RS22605 0.36 +1.5 4,681,404 + ABID97_RS22605 0.40 -0.1 4,681,438 - ABID97_RS22605 0.45 +1.4 4,681,848 + +1.0 4,681,857 + -0.4 4,681,858 - +2.8 4,681,861 + +2.4 4,681,861 + +0.3 4,681,865 + -1.2 4,682,278 - ABID97_RS22610 0.67 +3.9 4,682,450 + -3.0 4,682,493 + -0.2 4,682,494 - +3.7
Or see this region's nucleotide sequence