Experiment: D-Arabinose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS19665 and ABID97_RS19670 are separated by 127 nucleotides ABID97_RS19670 and ABID97_RS19675 are separated by 7 nucleotides ABID97_RS19675 and ABID97_RS19680 are separated by 90 nucleotides ABID97_RS19680 and ABID97_RS19685 are separated by 38 nucleotides
ABID97_RS19665: ABID97_RS19665 - DUF3014 domain-containing protein, at 4,062,317 to 4,063,261
_RS19665
ABID97_RS19670: ABID97_RS19670 - phospholipase, at 4,063,389 to 4,064,072
_RS19670
ABID97_RS19675: ABID97_RS19675 - nitronate monooxygenase, at 4,064,080 to 4,065,138
_RS19675
ABID97_RS19680: ABID97_RS19680 - DsbA family oxidoreductase, at 4,065,229 to 4,065,912
_RS19680
ABID97_RS19685: ABID97_RS19685 - MFS transporter, at 4,065,951 to 4,067,360
_RS19685
Position (kb)
4064
4065
4066 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4063.113 kb on + strand, within ABID97_RS19665 at 4063.127 kb on + strand, within ABID97_RS19665 at 4063.307 kb on + strand at 4063.307 kb on + strand at 4063.307 kb on + strand at 4063.307 kb on + strand at 4063.307 kb on + strand at 4063.307 kb on + strand at 4063.308 kb on - strand at 4063.308 kb on - strand at 4063.308 kb on - strand at 4063.308 kb on - strand at 4063.401 kb on - strand at 4063.873 kb on + strand, within ABID97_RS19670 at 4063.894 kb on + strand, within ABID97_RS19670 at 4063.895 kb on - strand, within ABID97_RS19670 at 4063.895 kb on - strand, within ABID97_RS19670 at 4064.417 kb on + strand, within ABID97_RS19675 at 4064.417 kb on + strand, within ABID97_RS19675 at 4064.417 kb on + strand, within ABID97_RS19675 at 4064.417 kb on + strand, within ABID97_RS19675 at 4064.417 kb on + strand, within ABID97_RS19675 at 4064.417 kb on + strand, within ABID97_RS19675 at 4064.418 kb on - strand, within ABID97_RS19675 at 4064.418 kb on - strand, within ABID97_RS19675 at 4064.859 kb on - strand, within ABID97_RS19675 at 4064.861 kb on + strand, within ABID97_RS19675 at 4064.862 kb on - strand, within ABID97_RS19675 at 4064.942 kb on + strand, within ABID97_RS19675 at 4064.943 kb on - strand, within ABID97_RS19675 at 4065.371 kb on + strand, within ABID97_RS19680 at 4065.372 kb on - strand, within ABID97_RS19680 at 4065.372 kb on - strand, within ABID97_RS19680 at 4065.372 kb on - strand, within ABID97_RS19680 at 4065.512 kb on + strand, within ABID97_RS19680 at 4065.605 kb on + strand, within ABID97_RS19680 at 4065.605 kb on + strand, within ABID97_RS19680 at 4065.606 kb on - strand, within ABID97_RS19680
Per-strain Table
Position Strand Gene LocusTag Fraction D-Arabinose (C) remove 4,063,113 + ABID97_RS19665 0.84 -0.1 4,063,127 + ABID97_RS19665 0.86 -0.1 4,063,307 + -0.3 4,063,307 + -0.4 4,063,307 + +0.1 4,063,307 + -0.1 4,063,307 + +0.4 4,063,307 + -0.8 4,063,308 - +0.2 4,063,308 - +0.5 4,063,308 - -0.1 4,063,308 - -0.4 4,063,401 - +1.1 4,063,873 + ABID97_RS19670 0.71 -0.2 4,063,894 + ABID97_RS19670 0.74 -0.5 4,063,895 - ABID97_RS19670 0.74 -0.7 4,063,895 - ABID97_RS19670 0.74 +0.1 4,064,417 + ABID97_RS19675 0.32 -0.4 4,064,417 + ABID97_RS19675 0.32 +0.8 4,064,417 + ABID97_RS19675 0.32 -0.6 4,064,417 + ABID97_RS19675 0.32 -0.7 4,064,417 + ABID97_RS19675 0.32 +2.1 4,064,417 + ABID97_RS19675 0.32 +0.1 4,064,418 - ABID97_RS19675 0.32 +0.1 4,064,418 - ABID97_RS19675 0.32 -0.4 4,064,859 - ABID97_RS19675 0.74 +1.1 4,064,861 + ABID97_RS19675 0.74 -0.2 4,064,862 - ABID97_RS19675 0.74 -0.3 4,064,942 + ABID97_RS19675 0.81 -1.8 4,064,943 - ABID97_RS19675 0.81 +1.0 4,065,371 + ABID97_RS19680 0.21 +0.1 4,065,372 - ABID97_RS19680 0.21 +0.3 4,065,372 - ABID97_RS19680 0.21 +0.0 4,065,372 - ABID97_RS19680 0.21 -0.6 4,065,512 + ABID97_RS19680 0.41 -0.1 4,065,605 + ABID97_RS19680 0.55 +0.0 4,065,605 + ABID97_RS19680 0.55 -0.2 4,065,606 - ABID97_RS19680 0.55 -0.9
Or see this region's nucleotide sequence