Experiment: D-Arabinose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS14755 and ABID97_RS14760 are separated by 64 nucleotides ABID97_RS14760 and ABID97_RS14765 are separated by 69 nucleotides
ABID97_RS14755: ABID97_RS14755 - 'GTP 3',8-cyclase MoaA' pseudo=_no_value transl_table=11, at 3,068,340 to 3,069,495
_RS14755
ABID97_RS14760: ABID97_RS14760 - SDR family oxidoreductase, at 3,069,560 to 3,070,321
_RS14760
ABID97_RS14765: ABID97_RS14765 - aldehyde dehydrogenase family protein, at 3,070,391 to 3,071,825
_RS14765
Position (kb)
3069
3070
3071 Strain fitness (log2 ratio)
-1
0
1
2 at 3068.798 kb on + strand, within ABID97_RS14755 at 3068.798 kb on + strand, within ABID97_RS14755 at 3068.798 kb on + strand, within ABID97_RS14755 at 3068.799 kb on - strand, within ABID97_RS14755 at 3068.799 kb on - strand, within ABID97_RS14755 at 3068.847 kb on - strand, within ABID97_RS14755 at 3068.863 kb on + strand, within ABID97_RS14755 at 3068.864 kb on - strand, within ABID97_RS14755 at 3069.282 kb on - strand, within ABID97_RS14755 at 3069.321 kb on - strand, within ABID97_RS14755 at 3069.321 kb on - strand, within ABID97_RS14755 at 3069.321 kb on - strand, within ABID97_RS14755 at 3069.321 kb on - strand, within ABID97_RS14755 at 3069.513 kb on - strand at 3069.593 kb on + strand at 3069.593 kb on + strand at 3069.594 kb on - strand at 3069.594 kb on - strand at 3069.630 kb on + strand at 3069.631 kb on - strand at 3069.966 kb on + strand, within ABID97_RS14760 at 3069.967 kb on - strand, within ABID97_RS14760 at 3069.967 kb on - strand, within ABID97_RS14760 at 3069.990 kb on + strand, within ABID97_RS14760 at 3069.991 kb on - strand, within ABID97_RS14760 at 3070.339 kb on + strand at 3070.434 kb on + strand at 3070.434 kb on + strand at 3070.435 kb on - strand at 3070.519 kb on + strand at 3070.519 kb on + strand at 3070.519 kb on + strand at 3070.520 kb on - strand at 3070.747 kb on + strand, within ABID97_RS14765 at 3070.747 kb on + strand, within ABID97_RS14765 at 3070.747 kb on + strand, within ABID97_RS14765 at 3070.748 kb on - strand, within ABID97_RS14765 at 3070.748 kb on - strand, within ABID97_RS14765 at 3070.748 kb on - strand, within ABID97_RS14765 at 3070.748 kb on - strand, within ABID97_RS14765 at 3070.948 kb on + strand, within ABID97_RS14765 at 3070.949 kb on - strand, within ABID97_RS14765 at 3070.949 kb on - strand, within ABID97_RS14765 at 3070.949 kb on - strand, within ABID97_RS14765 at 3070.949 kb on - strand, within ABID97_RS14765
Per-strain Table
Position Strand Gene LocusTag Fraction D-Arabinose (C) remove 3,068,798 + ABID97_RS14755 0.40 +0.5 3,068,798 + ABID97_RS14755 0.40 -1.0 3,068,798 + ABID97_RS14755 0.40 +0.3 3,068,799 - ABID97_RS14755 0.40 +1.0 3,068,799 - ABID97_RS14755 0.40 +0.7 3,068,847 - ABID97_RS14755 0.44 +0.3 3,068,863 + ABID97_RS14755 0.45 -0.5 3,068,864 - ABID97_RS14755 0.45 +0.2 3,069,282 - ABID97_RS14755 0.81 +0.9 3,069,321 - ABID97_RS14755 0.85 -0.1 3,069,321 - ABID97_RS14755 0.85 -0.0 3,069,321 - ABID97_RS14755 0.85 +0.8 3,069,321 - ABID97_RS14755 0.85 +0.5 3,069,513 - -0.2 3,069,593 + +0.2 3,069,593 + +0.1 3,069,594 - +0.3 3,069,594 - -0.1 3,069,630 + +0.6 3,069,631 - +1.0 3,069,966 + ABID97_RS14760 0.53 +0.8 3,069,967 - ABID97_RS14760 0.53 +0.2 3,069,967 - ABID97_RS14760 0.53 +0.5 3,069,990 + ABID97_RS14760 0.56 +1.4 3,069,991 - ABID97_RS14760 0.57 +0.0 3,070,339 + +0.0 3,070,434 + +0.5 3,070,434 + +0.6 3,070,435 - +0.0 3,070,519 + -0.2 3,070,519 + +1.9 3,070,519 + -0.3 3,070,520 - +0.2 3,070,747 + ABID97_RS14765 0.25 +0.1 3,070,747 + ABID97_RS14765 0.25 +1.2 3,070,747 + ABID97_RS14765 0.25 +0.5 3,070,748 - ABID97_RS14765 0.25 +0.3 3,070,748 - ABID97_RS14765 0.25 +0.0 3,070,748 - ABID97_RS14765 0.25 +1.2 3,070,748 - ABID97_RS14765 0.25 +0.9 3,070,948 + ABID97_RS14765 0.39 +0.6 3,070,949 - ABID97_RS14765 0.39 +0.4 3,070,949 - ABID97_RS14765 0.39 +1.1 3,070,949 - ABID97_RS14765 0.39 +0.1 3,070,949 - ABID97_RS14765 0.39 +0.4
Or see this region's nucleotide sequence