Experiment: D-Arabinose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS13950 and ABID97_RS13955 overlap by 1 nucleotides ABID97_RS13955 and ABID97_RS13960 overlap by 4 nucleotides ABID97_RS13960 and ABID97_RS13965 overlap by 11 nucleotides
ABID97_RS13950: ABID97_RS13950 - acetyl-CoA carboxylase biotin carboxylase subunit, at 2,897,828 to 2,899,876
_RS13950
ABID97_RS13955: ABID97_RS13955 - biotin synthase BioB, at 2,899,876 to 2,900,901
_RS13955
ABID97_RS13960: ABID97_RS13960 - VOC family protein, at 2,900,898 to 2,901,386
_RS13960
ABID97_RS13965: ABID97_RS13965 - Lrp/AsnC family transcriptional regulator, at 2,901,376 to 2,901,873
_RS13965
Position (kb)
2899
2900
2901 Strain fitness (log2 ratio)
-2
-1
0
1 at 2898.975 kb on - strand, within ABID97_RS13950 at 2898.998 kb on + strand, within ABID97_RS13950 at 2898.998 kb on + strand, within ABID97_RS13950 at 2899.259 kb on + strand, within ABID97_RS13950 at 2899.451 kb on + strand, within ABID97_RS13950 at 2899.452 kb on - strand, within ABID97_RS13950 at 2899.452 kb on - strand, within ABID97_RS13950 at 2899.643 kb on + strand, within ABID97_RS13950 at 2899.643 kb on + strand, within ABID97_RS13950 at 2899.643 kb on + strand, within ABID97_RS13950 at 2899.643 kb on + strand, within ABID97_RS13950 at 2899.644 kb on - strand, within ABID97_RS13950 at 2900.104 kb on + strand, within ABID97_RS13955 at 2900.104 kb on + strand, within ABID97_RS13955 at 2900.105 kb on - strand, within ABID97_RS13955 at 2900.374 kb on + strand, within ABID97_RS13955 at 2900.377 kb on + strand, within ABID97_RS13955 at 2900.377 kb on + strand, within ABID97_RS13955 at 2900.378 kb on - strand, within ABID97_RS13955 at 2900.378 kb on - strand, within ABID97_RS13955 at 2900.408 kb on - strand, within ABID97_RS13955 at 2900.410 kb on + strand, within ABID97_RS13955 at 2900.410 kb on + strand, within ABID97_RS13955 at 2900.610 kb on - strand, within ABID97_RS13955 at 2901.578 kb on + strand, within ABID97_RS13965 at 2901.579 kb on - strand, within ABID97_RS13965 at 2901.866 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Arabinose (C) remove 2,898,975 - ABID97_RS13950 0.56 -0.2 2,898,998 + ABID97_RS13950 0.57 -1.9 2,898,998 + ABID97_RS13950 0.57 -0.5 2,899,259 + ABID97_RS13950 0.70 -0.5 2,899,451 + ABID97_RS13950 0.79 -0.3 2,899,452 - ABID97_RS13950 0.79 -1.1 2,899,452 - ABID97_RS13950 0.79 -0.4 2,899,643 + ABID97_RS13950 0.89 -2.2 2,899,643 + ABID97_RS13950 0.89 +0.4 2,899,643 + ABID97_RS13950 0.89 -0.7 2,899,643 + ABID97_RS13950 0.89 -0.5 2,899,644 - ABID97_RS13950 0.89 -0.0 2,900,104 + ABID97_RS13955 0.22 -0.1 2,900,104 + ABID97_RS13955 0.22 -0.7 2,900,105 - ABID97_RS13955 0.22 -0.4 2,900,374 + ABID97_RS13955 0.49 +0.0 2,900,377 + ABID97_RS13955 0.49 -0.6 2,900,377 + ABID97_RS13955 0.49 -0.1 2,900,378 - ABID97_RS13955 0.49 -0.8 2,900,378 - ABID97_RS13955 0.49 -0.7 2,900,408 - ABID97_RS13955 0.52 +1.1 2,900,410 + ABID97_RS13955 0.52 -0.1 2,900,410 + ABID97_RS13955 0.52 -0.2 2,900,610 - ABID97_RS13955 0.72 +0.1 2,901,578 + ABID97_RS13965 0.41 -0.2 2,901,579 - ABID97_RS13965 0.41 -0.5 2,901,866 + -0.1
Or see this region's nucleotide sequence