Experiment: D-Arabinose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS13785 and ABID97_RS13790 overlap by 7 nucleotides ABID97_RS13790 and ABID97_RS13795 are separated by 163 nucleotides ABID97_RS13795 and ABID97_RS13800 are separated by 52 nucleotides
ABID97_RS13785: ABID97_RS13785 - terminase gpA endonuclease subunit, at 2,861,324 to 2,863,444
_RS13785
ABID97_RS13790: ABID97_RS13790 - Mor transcription activator family protein, at 2,863,438 to 2,863,740
_RS13790
ABID97_RS13795: ABID97_RS13795 - hypothetical protein, at 2,863,904 to 2,864,287
_RS13795
ABID97_RS13800: ABID97_RS13800 - hypothetical protein, at 2,864,340 to 2,865,113
_RS13800
Position (kb)
2863
2864
2865 Strain fitness (log2 ratio)
-1
0
1
2 at 2862.942 kb on - strand, within ABID97_RS13785 at 2863.617 kb on + strand, within ABID97_RS13790 at 2863.842 kb on + strand at 2863.842 kb on + strand at 2863.843 kb on - strand at 2863.880 kb on + strand at 2863.881 kb on - strand at 2863.881 kb on - strand at 2864.033 kb on + strand, within ABID97_RS13795 at 2864.033 kb on + strand, within ABID97_RS13795 at 2864.034 kb on - strand, within ABID97_RS13795 at 2864.525 kb on - strand, within ABID97_RS13800 at 2864.549 kb on + strand, within ABID97_RS13800 at 2864.729 kb on - strand, within ABID97_RS13800 at 2864.910 kb on - strand, within ABID97_RS13800 at 2864.976 kb on - strand, within ABID97_RS13800 at 2865.140 kb on + strand at 2865.140 kb on + strand at 2865.191 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Arabinose (C) remove 2,862,942 - ABID97_RS13785 0.76 -0.5 2,863,617 + ABID97_RS13790 0.59 -0.2 2,863,842 + -0.1 2,863,842 + +0.2 2,863,843 - -0.9 2,863,880 + -0.5 2,863,881 - +0.2 2,863,881 - +2.4 2,864,033 + ABID97_RS13795 0.34 -1.1 2,864,033 + ABID97_RS13795 0.34 -0.3 2,864,034 - ABID97_RS13795 0.34 -0.8 2,864,525 - ABID97_RS13800 0.24 +0.3 2,864,549 + ABID97_RS13800 0.27 -0.3 2,864,729 - ABID97_RS13800 0.50 -0.6 2,864,910 - ABID97_RS13800 0.74 -0.0 2,864,976 - ABID97_RS13800 0.82 +0.0 2,865,140 + -0.5 2,865,140 + -0.2 2,865,191 + -0.1
Or see this region's nucleotide sequence