Experiment: D-Arabinose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS03805 and ABID97_RS03810 are separated by 108 nucleotides ABID97_RS03810 and ABID97_RS03815 are separated by 66 nucleotides
ABID97_RS03805: ABID97_RS03805 - ATP-binding protein, at 779,399 to 780,595
_RS03805
ABID97_RS03810: ABID97_RS03810 - response regulator transcription factor, at 780,704 to 781,426
_RS03810
ABID97_RS03815: ABID97_RS03815 - NAD(P)/FAD-dependent oxidoreductase, at 781,493 to 783,136
_RS03815
Position (kb) 780
781
782 Strain fitness (log2 ratio) -2
-1
0
1 at 780.567 kb on + strand at 780.568 kb on - strand at 780.661 kb on - strand at 780.661 kb on - strand at 780.730 kb on - strand at 780.927 kb on + strand, within ABID97_RS03810 at 780.928 kb on - strand, within ABID97_RS03810 at 781.353 kb on + strand, within ABID97_RS03810 at 781.353 kb on + strand, within ABID97_RS03810 at 781.354 kb on - strand at 781.354 kb on - strand at 781.354 kb on - strand at 781.474 kb on + strand at 781.924 kb on - strand, within ABID97_RS03815 at 781.926 kb on + strand, within ABID97_RS03815 at 781.927 kb on - strand, within ABID97_RS03815 at 781.932 kb on + strand, within ABID97_RS03815 at 781.932 kb on + strand, within ABID97_RS03815 at 781.983 kb on + strand, within ABID97_RS03815 at 781.995 kb on + strand, within ABID97_RS03815 at 781.996 kb on - strand, within ABID97_RS03815 at 782.028 kb on + strand, within ABID97_RS03815 at 782.028 kb on + strand, within ABID97_RS03815 at 782.028 kb on + strand, within ABID97_RS03815 at 782.029 kb on - strand, within ABID97_RS03815 at 782.040 kb on + strand, within ABID97_RS03815 at 782.040 kb on + strand, within ABID97_RS03815 at 782.040 kb on + strand, within ABID97_RS03815 at 782.040 kb on + strand, within ABID97_RS03815 at 782.041 kb on - strand, within ABID97_RS03815 at 782.103 kb on + strand, within ABID97_RS03815 at 782.103 kb on + strand, within ABID97_RS03815 at 782.103 kb on + strand, within ABID97_RS03815 at 782.103 kb on + strand, within ABID97_RS03815 at 782.103 kb on + strand, within ABID97_RS03815 at 782.104 kb on - strand, within ABID97_RS03815 at 782.104 kb on - strand, within ABID97_RS03815 at 782.104 kb on - strand, within ABID97_RS03815 at 782.142 kb on + strand, within ABID97_RS03815 at 782.295 kb on + strand, within ABID97_RS03815
Per-strain Table
Position Strand Gene LocusTag Fraction D-Arabinose (C) remove 780,567 + -2.5 780,568 - -0.8 780,661 - +0.2 780,661 - -0.3 780,730 - +0.1 780,927 + ABID97_RS03810 0.31 +0.4 780,928 - ABID97_RS03810 0.31 -0.2 781,353 + ABID97_RS03810 0.90 +1.0 781,353 + ABID97_RS03810 0.90 +0.4 781,354 - -0.3 781,354 - -0.6 781,354 - +0.4 781,474 + +1.1 781,924 - ABID97_RS03815 0.26 +0.2 781,926 + ABID97_RS03815 0.26 +0.7 781,927 - ABID97_RS03815 0.26 -0.8 781,932 + ABID97_RS03815 0.27 +0.3 781,932 + ABID97_RS03815 0.27 -1.9 781,983 + ABID97_RS03815 0.30 +0.6 781,995 + ABID97_RS03815 0.31 -0.0 781,996 - ABID97_RS03815 0.31 -0.2 782,028 + ABID97_RS03815 0.33 -0.8 782,028 + ABID97_RS03815 0.33 +1.0 782,028 + ABID97_RS03815 0.33 -0.4 782,029 - ABID97_RS03815 0.33 -0.3 782,040 + ABID97_RS03815 0.33 -0.3 782,040 + ABID97_RS03815 0.33 +0.1 782,040 + ABID97_RS03815 0.33 -0.5 782,040 + ABID97_RS03815 0.33 -0.4 782,041 - ABID97_RS03815 0.33 -0.6 782,103 + ABID97_RS03815 0.37 +0.7 782,103 + ABID97_RS03815 0.37 -1.0 782,103 + ABID97_RS03815 0.37 -0.1 782,103 + ABID97_RS03815 0.37 +0.6 782,103 + ABID97_RS03815 0.37 +0.0 782,104 - ABID97_RS03815 0.37 -0.1 782,104 - ABID97_RS03815 0.37 +0.0 782,104 - ABID97_RS03815 0.37 +0.5 782,142 + ABID97_RS03815 0.39 -0.5 782,295 + ABID97_RS03815 0.49 -0.4
Or see this region's nucleotide sequence