Experiment: D-Arabinose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS03645 and ABID97_RS03650 are separated by 123 nucleotides ABID97_RS03650 and ABID97_RS03655 are separated by 8 nucleotides
ABID97_RS03645: ABID97_RS03645 - LysR substrate-binding domain-containing protein, at 750,128 to 751,013
_RS03645
ABID97_RS03650: ABID97_RS03650 - FAD-linked oxidase C-terminal domain-containing protein, at 751,137 to 752,639
_RS03650
ABID97_RS03655: ABID97_RS03655 - glycolate oxidase subunit GlcE, at 752,648 to 753,775
_RS03655
Position (kb) 751
752
753 Strain fitness (log2 ratio) -1
0
1 at 750.330 kb on - strand, within ABID97_RS03645 at 750.482 kb on + strand, within ABID97_RS03645 at 750.579 kb on + strand, within ABID97_RS03645 at 750.643 kb on - strand, within ABID97_RS03645 at 750.643 kb on - strand, within ABID97_RS03645 at 750.932 kb on + strand at 750.933 kb on - strand at 751.095 kb on + strand at 751.132 kb on + strand at 751.132 kb on + strand at 751.133 kb on - strand at 751.169 kb on + strand at 751.293 kb on + strand, within ABID97_RS03650 at 751.566 kb on + strand, within ABID97_RS03650 at 751.567 kb on - strand, within ABID97_RS03650 at 751.569 kb on + strand, within ABID97_RS03650 at 751.569 kb on + strand, within ABID97_RS03650 at 751.570 kb on - strand, within ABID97_RS03650 at 751.653 kb on + strand, within ABID97_RS03650 at 751.653 kb on + strand, within ABID97_RS03650 at 751.654 kb on - strand, within ABID97_RS03650 at 751.986 kb on + strand, within ABID97_RS03650 at 752.190 kb on + strand, within ABID97_RS03650 at 752.190 kb on + strand, within ABID97_RS03650 at 752.190 kb on + strand, within ABID97_RS03650 at 752.190 kb on + strand, within ABID97_RS03650 at 752.191 kb on - strand, within ABID97_RS03650 at 752.191 kb on - strand, within ABID97_RS03650 at 752.191 kb on - strand, within ABID97_RS03650 at 752.191 kb on - strand, within ABID97_RS03650 at 752.191 kb on - strand, within ABID97_RS03650 at 752.191 kb on - strand, within ABID97_RS03650 at 752.268 kb on + strand, within ABID97_RS03650 at 752.268 kb on + strand, within ABID97_RS03650 at 752.269 kb on - strand, within ABID97_RS03650 at 752.269 kb on - strand, within ABID97_RS03650 at 752.269 kb on - strand, within ABID97_RS03650 at 752.804 kb on + strand, within ABID97_RS03655 at 752.805 kb on - strand, within ABID97_RS03655 at 753.002 kb on + strand, within ABID97_RS03655
Per-strain Table
Position Strand Gene LocusTag Fraction D-Arabinose (C) remove 750,330 - ABID97_RS03645 0.23 +0.0 750,482 + ABID97_RS03645 0.40 +0.2 750,579 + ABID97_RS03645 0.51 -0.3 750,643 - ABID97_RS03645 0.58 -0.0 750,643 - ABID97_RS03645 0.58 -0.6 750,932 + -0.2 750,933 - -0.1 751,095 + -0.2 751,132 + +0.1 751,132 + -0.5 751,133 - +0.1 751,169 + -0.7 751,293 + ABID97_RS03650 0.10 -0.8 751,566 + ABID97_RS03650 0.29 -0.2 751,567 - ABID97_RS03650 0.29 +0.8 751,569 + ABID97_RS03650 0.29 -0.1 751,569 + ABID97_RS03650 0.29 -0.7 751,570 - ABID97_RS03650 0.29 -0.2 751,653 + ABID97_RS03650 0.34 -1.0 751,653 + ABID97_RS03650 0.34 -0.1 751,654 - ABID97_RS03650 0.34 -1.3 751,986 + ABID97_RS03650 0.56 -0.6 752,190 + ABID97_RS03650 0.70 -0.0 752,190 + ABID97_RS03650 0.70 -1.0 752,190 + ABID97_RS03650 0.70 -0.9 752,190 + ABID97_RS03650 0.70 -0.2 752,191 - ABID97_RS03650 0.70 +0.2 752,191 - ABID97_RS03650 0.70 -1.5 752,191 - ABID97_RS03650 0.70 -0.1 752,191 - ABID97_RS03650 0.70 -0.3 752,191 - ABID97_RS03650 0.70 -0.3 752,191 - ABID97_RS03650 0.70 +0.4 752,268 + ABID97_RS03650 0.75 -1.6 752,268 + ABID97_RS03650 0.75 -0.8 752,269 - ABID97_RS03650 0.75 -0.1 752,269 - ABID97_RS03650 0.75 -0.2 752,269 - ABID97_RS03650 0.75 -0.9 752,804 + ABID97_RS03655 0.14 -0.8 752,805 - ABID97_RS03655 0.14 +0.6 753,002 + ABID97_RS03655 0.31 -0.3
Or see this region's nucleotide sequence