Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2217

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
2,433,383	+				-0.2
2,433,384	-				+0.2
2,433,384	-				-0.4
2,433,391	+				-0.8
2,433,391	+				-1.2
2,433,392	-				-0.4
2,433,392	-				+0.4
2,433,392	-				+0.3
2,433,392	-				-0.2
2,433,429	-				-0.9
2,433,533	+				-0.6
2,433,534	-				-0.4
2,433,534	-				+0.2
2,433,545	+				-0.6
2,433,545	+				-1.2
2,433,545	+				+0.5
2,433,546	-				-1.4
2,433,546	-				-0.8
2,433,546	-				-0.2
2,433,860	+				-0.3
2,433,860	+				-0.7
2,433,861	-				-0.7
2,433,861	-				-0.8
2,433,861	-				-2.0
2,433,861	-				-0.2
2,433,861	-				+0.9
2,433,861	-				+0.6
2,433,861	-				-0.9
2,434,050	-		PfGW456L13_2216	0.43	+1.2
2,434,050	-		PfGW456L13_2216	0.43	+0.2
2,434,050	-		PfGW456L13_2216	0.43	-0.7
2,434,157	+		PfGW456L13_2216	0.65	-0.6
2,434,157	+		PfGW456L13_2216	0.65	-0.9
2,434,157	+		PfGW456L13_2216	0.65	-0.2
2,434,158	-		PfGW456L13_2216	0.65	+0.9
2,434,158	-		PfGW456L13_2216	0.65	-1.8
2,434,158	-		PfGW456L13_2216	0.65	-0.2
2,434,158	-		PfGW456L13_2216	0.65	+0.8
2,434,158	-		PfGW456L13_2216	0.65	+0.4
2,434,164	-		PfGW456L13_2216	0.66	-1.5
2,434,164	-		PfGW456L13_2216	0.66	+1.1
2,434,164	-		PfGW456L13_2216	0.66	+0.1
2,434,164	-		PfGW456L13_2216	0.66	-2.2
2,434,164	-		PfGW456L13_2216	0.66	-2.5
2,434,164	-		PfGW456L13_2216	0.66	-1.2
2,434,234	+		PfGW456L13_2216	0.80	-1.8
2,434,234	+		PfGW456L13_2216	0.80	+0.4
2,434,234	+		PfGW456L13_2216	0.80	-0.7
2,434,234	+		PfGW456L13_2216	0.80	+0.7
2,434,234	+		PfGW456L13_2216	0.80	+0.1
2,434,234	+		PfGW456L13_2216	0.80	-0.0
2,434,234	+		PfGW456L13_2216	0.80	+0.5
2,434,234	+		PfGW456L13_2216	0.80	-0.5
2,434,234	+		PfGW456L13_2216	0.80	+0.0
2,434,234	+		PfGW456L13_2216	0.80	-0.3
2,434,234	+		PfGW456L13_2216	0.80	-0.4
2,434,234	+		PfGW456L13_2216	0.80	+1.5
2,434,235	-		PfGW456L13_2216	0.80	-0.5
2,434,235	-		PfGW456L13_2216	0.80	+0.4
2,434,235	-		PfGW456L13_2216	0.80	+0.1
2,434,235	-		PfGW456L13_2216	0.80	+2.9
2,434,235	-		PfGW456L13_2216	0.80	-1.5
2,434,235	-		PfGW456L13_2216	0.80	+2.0
2,434,235	-		PfGW456L13_2216	0.80	+1.0
2,434,235	-		PfGW456L13_2216	0.80	-1.3
2,434,235	-		PfGW456L13_2216	0.80	+0.7
2,434,235	-		PfGW456L13_2216	0.80	+2.1
2,434,235	-		PfGW456L13_2216	0.80	-1.8
2,434,235	-		PfGW456L13_2216	0.80	+0.0
2,434,235	-		PfGW456L13_2216	0.80	+1.2
2,434,235	-		PfGW456L13_2216	0.80	+0.4
2,434,235	-		PfGW456L13_2216	0.80	-1.1
2,434,235	-				+1.7
2,434,235	-		PfGW456L13_2216	0.80	-0.6
2,434,366	-				+1.6
2,434,366	-				-1.0
2,434,366	-				+1.4
2,434,510	-				-0.6
2,434,515	+				+2.1
2,434,515	+				+1.3
2,434,731	+		PfGW456L13_2217	0.15	+0.0
2,434,731	+		PfGW456L13_2217	0.15	-1.9
2,434,731	+		PfGW456L13_2217	0.15	+0.2
2,434,731	+		PfGW456L13_2217	0.15	+2.0
2,434,731	+		PfGW456L13_2217	0.15	+1.8
2,434,731	+		PfGW456L13_2217	0.15	+1.7
2,434,732	-		PfGW456L13_2217	0.15	+0.9
2,434,732	-		PfGW456L13_2217	0.15	+0.6
2,434,732	-		PfGW456L13_2217	0.15	-2.6
2,434,732	-		PfGW456L13_2217	0.15	+1.7
2,434,864	-		PfGW456L13_2217	0.20	+0.4
2,434,878	+		PfGW456L13_2217	0.20	-0.3
2,434,878	+		PfGW456L13_2217	0.20	-0.3
2,434,879	-		PfGW456L13_2217	0.20	-0.9
2,434,879	-		PfGW456L13_2217	0.20	+0.1
2,434,879	-		PfGW456L13_2217	0.20	-0.2
2,434,879	-		PfGW456L13_2217	0.20	-0.7
2,434,879	-		PfGW456L13_2217	0.20	+1.1
2,435,006	+		PfGW456L13_2217	0.26	+1.2
2,435,006	+		PfGW456L13_2217	0.26	+1.0
2,435,007	-		PfGW456L13_2217	0.26	-1.5
2,435,007	-		PfGW456L13_2217	0.26	+1.3
2,435,007	-		PfGW456L13_2217	0.26	+0.7
2,435,027	+		PfGW456L13_2217	0.26	+0.3
2,435,027	+		PfGW456L13_2217	0.26	-0.8
2,435,028	-		PfGW456L13_2217	0.26	-1.9
2,435,028	-		PfGW456L13_2217	0.26	+3.4
2,435,028	-		PfGW456L13_2217	0.26	+0.3
2,435,057	+		PfGW456L13_2217	0.28	+0.5
2,435,057	+		PfGW456L13_2217	0.28	-1.0
2,435,256	+		PfGW456L13_2217	0.35	-0.7
2,435,340	+		PfGW456L13_2217	0.39	-0.0
2,435,340	+		PfGW456L13_2217	0.39	+1.6
2,435,341	-		PfGW456L13_2217	0.39	+0.0
2,435,341	-		PfGW456L13_2217	0.39	-0.2
2,435,341	-		PfGW456L13_2217	0.39	+1.3
2,436,192	+		PfGW456L13_2217	0.73	+1.2
2,436,224	+		PfGW456L13_2217	0.74	-1.9
2,436,234	+		PfGW456L13_2217	0.75	-1.3
2,436,234	+		PfGW456L13_2217	0.75	+0.4
2,436,234	+		PfGW456L13_2217	0.75	+0.7
2,436,315	+		PfGW456L13_2217	0.78	-0.5
2,436,342	+		PfGW456L13_2217	0.79	+0.1
2,436,342	+		PfGW456L13_2217	0.79	+1.5
2,436,342	+		PfGW456L13_2217	0.79	-1.1
2,436,342	+		PfGW456L13_2217	0.79	+0.4
2,436,342	+		PfGW456L13_2217	0.79	-1.4
2,436,342	+		PfGW456L13_2217	0.79	+1.3
2,436,343	-		PfGW456L13_2217	0.79	+0.3
2,436,343	-		PfGW456L13_2217	0.79	-2.8
2,436,343	-		PfGW456L13_2217	0.79	+0.3
2,436,343	-		PfGW456L13_2217	0.79	-0.3
2,436,343	-		PfGW456L13_2217	0.79	+0.6
2,436,471	-		PfGW456L13_2217	0.84	-0.5
2,436,471	-		PfGW456L13_2217	0.84	+1.4
2,436,635	+				-0.7
2,436,635	+				-1.6
2,436,635	+				+0.8
2,436,636	-				-0.9
2,436,636	-				-0.1
2,436,636	-				-0.1
2,436,636	-				-1.1
2,436,636	-				-0.0
2,436,738	+				-1.9
2,436,739	-				-0.0
2,437,521	+				+1.1
2,437,522	-				+0.6
2,437,654	+		PfGW456L13_2219	0.15	+4.6
2,437,654	+		PfGW456L13_2219	0.15	-1.9
2,437,654	+		PfGW456L13_2219	0.15	-0.3
2,437,654	+		PfGW456L13_2219	0.15	-0.5
2,437,655	-		PfGW456L13_2219	0.15	+0.1
2,437,655	-		PfGW456L13_2219	0.15	-0.9
2,437,655	-		PfGW456L13_2219	0.15	-2.4
2,437,655	-		PfGW456L13_2219	0.15	-0.5
2,437,655	-		PfGW456L13_2219	0.15	-2.2
2,437,655	-		PfGW456L13_2219	0.15	-1.4
2,437,655	-		PfGW456L13_2219	0.15	-1.9
2,437,816	+		PfGW456L13_2219	0.41	-2.1
2,437,816	+				+1.3
2,437,816	+		PfGW456L13_2219	0.41	+0.9
2,437,817	-		PfGW456L13_2219	0.42	-1.1