Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1868

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
2,053,071	+		PfGW456L13_1867	0.59	-3.4
2,053,071	+		PfGW456L13_1867	0.59	-0.5
2,053,071	+		PfGW456L13_1867	0.59	-0.0
2,053,072	-		PfGW456L13_1867	0.59	+0.8
2,053,197	+		PfGW456L13_1867	0.68	-1.2
2,053,197	+		PfGW456L13_1867	0.68	-0.4
2,053,198	-		PfGW456L13_1867	0.69	+0.2
2,053,200	+		PfGW456L13_1867	0.69	-1.5
2,053,201	-		PfGW456L13_1867	0.69	-0.1
2,053,201	-		PfGW456L13_1867	0.69	+0.4
2,053,266	+		PfGW456L13_1867	0.73	+0.5
2,053,267	-		PfGW456L13_1867	0.74	+0.4
2,053,390	+		PfGW456L13_1867	0.82	-0.9
2,053,391	-		PfGW456L13_1867	0.83	+1.0
2,053,479	+		PfGW456L13_1867	0.89	-1.0
2,053,479	+		PfGW456L13_1867	0.89	-1.7
2,053,479	+		PfGW456L13_1867	0.89	-0.9
2,053,479	+		PfGW456L13_1867	0.89	+1.3
2,053,479	+		PfGW456L13_1867	0.89	-0.2
2,053,479	+		PfGW456L13_1867	0.89	-0.1
2,053,480	-		PfGW456L13_1867	0.89	+0.4
2,053,480	-		PfGW456L13_1867	0.89	-0.2
2,053,480	-		PfGW456L13_1867	0.89	-0.9
2,053,480	-		PfGW456L13_1867	0.89	-0.7
2,053,480	-		PfGW456L13_1867	0.89	+0.4
2,053,480	-		PfGW456L13_1867	0.89	-1.5
2,053,654	+				+0.9
2,053,654	+				+0.4
2,053,654	+				-0.2
2,053,654	+				-3.4
2,053,655	-				-1.6
2,053,671	+				+0.4
2,053,671	+				-1.4
2,053,671	+				+1.0
2,053,671	+				-1.1
2,053,671	+				-0.8
2,053,672	-				+0.8
2,053,672	-				-0.5
2,053,672	-				+0.0
2,053,672	-				-1.6
2,053,672	-				+1.3
2,053,837	-				-1.0
2,053,842	+				+0.6
2,053,842	+				+0.9
2,053,843	-				-1.5
2,053,843	-				+0.2
2,053,843	-				+1.0
2,053,920	+				-0.5
2,053,920	+				+1.5
2,053,920	+				+1.4
2,053,920	+				+1.3
2,053,920	+				-0.2
2,053,920	+				+0.0
2,053,921	-				+1.0
2,053,921	-				+0.9
2,054,304	+		PfGW456L13_1868	0.16	+1.8
2,054,304	+		PfGW456L13_1868	0.16	-0.3
2,054,304	+		PfGW456L13_1868	0.16	-2.0
2,054,304	+		PfGW456L13_1868	0.16	-0.3
2,054,304	+		PfGW456L13_1868	0.16	-0.2
2,054,304	+		PfGW456L13_1868	0.16	+0.7
2,054,305	-		PfGW456L13_1868	0.16	-0.7
2,054,305	-		PfGW456L13_1868	0.16	-2.4
2,054,317	-		PfGW456L13_1868	0.17	-0.3
2,054,343	+		PfGW456L13_1868	0.18	-1.8
2,054,343	+		PfGW456L13_1868	0.18	+1.5
2,054,343	+		PfGW456L13_1868	0.18	+0.1
2,054,343	+		PfGW456L13_1868	0.18	-2.0
2,054,343	+		PfGW456L13_1868	0.18	+2.5
2,054,343	+		PfGW456L13_1868	0.18	+0.4
2,054,343	+		PfGW456L13_1868	0.18	-1.3
2,054,343	+		PfGW456L13_1868	0.18	-0.1
2,054,343	+		PfGW456L13_1868	0.18	+0.3
2,054,343	+		PfGW456L13_1868	0.18	+1.8
2,054,343	+		PfGW456L13_1868	0.18	+1.0
2,054,344	-		PfGW456L13_1868	0.18	-2.0
2,054,344	-		PfGW456L13_1868	0.18	+1.3
2,054,344	-		PfGW456L13_1868	0.18	-2.1
2,054,344	-		PfGW456L13_1868	0.18	-0.2
2,054,344	-		PfGW456L13_1868	0.18	+0.2
2,054,344	-		PfGW456L13_1868	0.18	+0.3
2,054,344	-		PfGW456L13_1868	0.18	-0.7
2,054,344	-		PfGW456L13_1868	0.18	+1.0
2,054,344	-		PfGW456L13_1868	0.18	+1.0
2,054,344	-		PfGW456L13_1868	0.18	-0.1
2,054,344	-		PfGW456L13_1868	0.18	+1.1
2,054,401	+		PfGW456L13_1868	0.20	+1.0
2,054,401	+		PfGW456L13_1868	0.20	-0.1
2,054,401	+		PfGW456L13_1868	0.20	+0.1
2,054,401	+		PfGW456L13_1868	0.20	-0.6
2,054,402	-		PfGW456L13_1868	0.20	+0.3
2,054,402	-		PfGW456L13_1868	0.20	-0.5
2,054,402	-		PfGW456L13_1868	0.20	-1.1
2,054,402	-		PfGW456L13_1868	0.20	+0.8
2,054,402	-		PfGW456L13_1868	0.20	+1.0
2,054,402	-		PfGW456L13_1868	0.20	+0.9
2,054,402	-		PfGW456L13_1868	0.20	+1.3
2,054,409	+		PfGW456L13_1868	0.20	-1.1
2,054,409	+		PfGW456L13_1868	0.20	-1.5
2,054,409	+		PfGW456L13_1868	0.20	+0.6
2,054,409	+		PfGW456L13_1868	0.20	+0.8
2,054,409	+		PfGW456L13_1868	0.20	-0.1
2,054,409	+		PfGW456L13_1868	0.20	+0.4
2,054,410	-		PfGW456L13_1868	0.20	-1.5
2,054,410	-		PfGW456L13_1868	0.20	-1.2
2,054,410	-		PfGW456L13_1868	0.20	-1.2
2,054,410	-		PfGW456L13_1868	0.20	-0.7
2,054,410	-		PfGW456L13_1868	0.20	+1.6
2,054,664	+		PfGW456L13_1868	0.29	-0.9
2,054,664	+		PfGW456L13_1868	0.29	-1.2
2,054,664	+		PfGW456L13_1868	0.29	-0.3
2,054,664	+		PfGW456L13_1868	0.29	-1.4
2,054,665	-		PfGW456L13_1868	0.29	-0.7
2,054,665	-		PfGW456L13_1868	0.29	+0.1
2,054,665	-		PfGW456L13_1868	0.29	-0.3
2,054,665	-		PfGW456L13_1868	0.29	+0.6
2,054,665	-		PfGW456L13_1868	0.29	-1.0
2,054,665	-		PfGW456L13_1868	0.29	-0.2
2,054,742	+		PfGW456L13_1868	0.32	+0.2
2,054,943	+		PfGW456L13_1868	0.39	+0.2
2,054,970	+		PfGW456L13_1868	0.40	-0.7
2,054,970	+		PfGW456L13_1868	0.40	+0.1
2,054,971	-		PfGW456L13_1868	0.40	-0.3
2,054,971	-		PfGW456L13_1868	0.40	-2.2
2,054,971	-		PfGW456L13_1868	0.40	-2.2
2,055,643	-		PfGW456L13_1868	0.63	+0.4
2,055,643	-		PfGW456L13_1868	0.63	+0.0
2,055,643	-		PfGW456L13_1868	0.63	+0.3
2,055,651	+		PfGW456L13_1868	0.64	+1.1
2,055,651	+		PfGW456L13_1868	0.64	+1.1
2,055,651	+		PfGW456L13_1868	0.64	-0.9
2,055,651	+		PfGW456L13_1868	0.64	-0.9
2,055,651	+		PfGW456L13_1868	0.64	-1.6
2,055,651	+		PfGW456L13_1868	0.64	-0.3
2,055,651	+		PfGW456L13_1868	0.64	-1.6
2,055,651	+		PfGW456L13_1868	0.64	-3.1
2,055,651	+		PfGW456L13_1868	0.64	+0.6
2,055,652	-		PfGW456L13_1868	0.64	+0.2
2,055,652	-		PfGW456L13_1868	0.64	-0.0
2,055,652	-		PfGW456L13_1868	0.64	+1.3
2,055,652	-		PfGW456L13_1868	0.64	+1.0
2,055,652	-		PfGW456L13_1868	0.64	+1.2
2,055,677	+		PfGW456L13_1868	0.65	-1.7
2,055,677	+		PfGW456L13_1868	0.65	-0.7
2,055,677	+		PfGW456L13_1868	0.65	+1.8
2,055,678	-		PfGW456L13_1868	0.65	+2.5
2,055,678	-		PfGW456L13_1868	0.65	-1.0
2,055,678	-		PfGW456L13_1868	0.65	-2.7
2,055,678	-		PfGW456L13_1868	0.65	-1.0
2,055,837	+		PfGW456L13_1868	0.70	-1.9
2,055,837	+		PfGW456L13_1868	0.70	-0.1
2,055,837	+		PfGW456L13_1868	0.70	+0.8
2,055,837	+		PfGW456L13_1868	0.70	+0.6
2,055,838	-		PfGW456L13_1868	0.70	-2.1
2,055,838	-		PfGW456L13_1868	0.70	+0.9
2,055,838	-		PfGW456L13_1868	0.70	-1.3
2,055,838	-		PfGW456L13_1868	0.70	-1.3
2,055,947	+		PfGW456L13_1868	0.74	+0.3
2,055,947	+		PfGW456L13_1868	0.74	-1.4
2,055,947	+		PfGW456L13_1868	0.74	-0.9
2,055,948	-		PfGW456L13_1868	0.74	+0.0
2,056,039	-		PfGW456L13_1868	0.77	+0.3
2,056,067	+		PfGW456L13_1868	0.78	-0.9
2,056,067	+		PfGW456L13_1868	0.78	-0.7
2,056,067	+		PfGW456L13_1868	0.78	-0.6
2,056,136	+		PfGW456L13_1868	0.81	+1.5
2,056,136	+		PfGW456L13_1868	0.81	-0.9
2,056,359	+		PfGW456L13_1868	0.88	+1.1
2,056,359	+		PfGW456L13_1868	0.88	+0.3
2,056,360	-		PfGW456L13_1868	0.89	-1.4
2,056,360	-		PfGW456L13_1868	0.89	-0.8
2,056,360	-		PfGW456L13_1868	0.89	-0.4
2,056,368	+		PfGW456L13_1868	0.89	+1.7
2,056,368	+		PfGW456L13_1868	0.89	-1.4
2,056,369	-		PfGW456L13_1868	0.89	-1.0
2,056,425	+				+0.7
2,056,428	+				+1.2
2,056,429	-				+1.5
2,056,466	-				-0.9
2,056,666	+				-0.9
2,056,733	+				+0.3
2,056,886	+		PfGW456L13_1869	0.49	-1.3
2,056,886	+		PfGW456L13_1869	0.49	+2.1
2,056,886	+		PfGW456L13_1869	0.49	+1.4
2,056,887	-		PfGW456L13_1869	0.49	-0.3
2,056,887	-		PfGW456L13_1869	0.49	-0.7
2,056,887	-		PfGW456L13_1869	0.49	+1.8
2,056,887	-		PfGW456L13_1869	0.49	-1.1
2,056,887	-		PfGW456L13_1869	0.49	-1.2
2,056,887	-		PfGW456L13_1869	0.49	+0.2
2,056,887	-		PfGW456L13_1869	0.49	+0.6
2,056,887	-		PfGW456L13_1869	0.49	+3.5
2,056,887	-		PfGW456L13_1869	0.49	+1.2
2,056,943	+		PfGW456L13_1869	0.64	-1.9
2,057,064	+				-1.9
2,057,064	+				-0.9
2,057,065	-				+2.0
2,057,092	+				+0.3
2,057,093	-				-2.5
2,057,093	-				-0.3
2,057,093	-				-1.3
2,057,148	-				+0.1
2,057,158	-				-0.3
2,057,158	-				+0.6
2,057,158	-				+1.8
2,057,161	+				+1.1
2,057,161	+				+0.9
2,057,161	+				+0.0
2,057,161	+				+0.9
2,057,188	+				-0.9
2,057,188	+				+0.8
2,057,262	+				+0.6
2,057,262	+				-0.2
2,057,262	+				-0.5
2,057,262	+				+0.9
2,057,263	-				-1.1
2,057,263	-				+0.2
2,057,263	-				+2.0
2,057,263	-				-0.7
2,057,263	-				+0.5
2,057,264	+				+1.9
2,057,264	+				-1.9
2,057,264	+				+1.4
2,057,264	+				-1.6
2,057,264	+				+1.2
2,057,265	-				-0.2
2,057,265	-				-0.3
2,057,265	-				+1.1
2,057,265	-				-0.1
2,057,275	+				+1.9
2,057,276	-				-0.3
2,057,276	-				+0.0
2,057,436	+				+0.3
2,057,436	+				-0.3
2,057,437	-				+0.9
2,057,461	+				-3.4
2,057,461	+				-1.0
2,057,461	+				+0.4
2,057,461	+				-1.2
2,057,461	+				-1.0
2,057,461	+				+0.1
2,057,461	+				-1.2
2,057,461	+				+0.3
2,057,461	+				+1.1
2,057,462	-				+1.9
2,057,462	-				+1.4
2,057,462	-				-0.2
2,057,462	-				+1.2
2,057,462	-				-0.3
2,057,537	+				-0.3
2,057,537	+				-0.9
2,057,609	+				-0.7
2,057,609	+				+0.5
2,057,618	+				-0.7