Experiment: Thallium(I) acetate 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_18600 and PS417_18605 are separated by 140 nucleotides PS417_18605 and PS417_18610 are separated by 66 nucleotides
PS417_18600: PS417_18600 - isopropylmalate isomerase, at 4,039,447 to 4,040,865
_18600
PS417_18605: PS417_18605 - LysR family transcriptional regulator, at 4,041,006 to 4,041,896
_18605
PS417_18610: PS417_18610 - histidine kinase, at 4,041,963 to 4,045,259
_18610
Position (kb)
4041
4042 Strain fitness (log2 ratio)
-2
-1
0
1 at 4040.585 kb on + strand, within PS417_18600 at 4040.786 kb on + strand at 4040.786 kb on + strand at 4040.786 kb on + strand at 4040.787 kb on - strand at 4040.787 kb on - strand at 4040.787 kb on - strand at 4040.886 kb on + strand at 4041.134 kb on - strand, within PS417_18605 at 4041.334 kb on + strand at 4041.334 kb on + strand, within PS417_18605 at 4041.338 kb on + strand, within PS417_18605 at 4041.339 kb on - strand at 4041.339 kb on - strand, within PS417_18605 at 4041.339 kb on - strand, within PS417_18605 at 4041.355 kb on - strand, within PS417_18605 at 4041.599 kb on + strand, within PS417_18605 at 4041.672 kb on - strand, within PS417_18605 at 4041.675 kb on + strand, within PS417_18605 at 4041.676 kb on - strand, within PS417_18605 at 4041.686 kb on + strand, within PS417_18605 at 4041.761 kb on + strand, within PS417_18605 at 4041.796 kb on + strand, within PS417_18605 at 4041.802 kb on - strand, within PS417_18605 at 4041.802 kb on - strand, within PS417_18605 at 4041.961 kb on + strand at 4041.962 kb on - strand at 4042.680 kb on - strand, within PS417_18610 at 4042.680 kb on - strand, within PS417_18610 at 4042.882 kb on - strand, within PS417_18610
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.0625 mg/ml remove 4,040,585 + PS417_18600 0.80 -0.4 4,040,786 + +0.3 4,040,786 + -0.3 4,040,786 + +0.8 4,040,787 - -0.6 4,040,787 - -0.3 4,040,787 - +0.7 4,040,886 + -0.3 4,041,134 - PS417_18605 0.14 -0.3 4,041,334 + -1.0 4,041,334 + PS417_18605 0.37 +0.0 4,041,338 + PS417_18605 0.37 -1.5 4,041,339 - -1.5 4,041,339 - PS417_18605 0.37 -0.3 4,041,339 - PS417_18605 0.37 +0.3 4,041,355 - PS417_18605 0.39 -0.4 4,041,599 + PS417_18605 0.67 -0.3 4,041,672 - PS417_18605 0.75 -0.4 4,041,675 + PS417_18605 0.75 -1.1 4,041,676 - PS417_18605 0.75 -0.4 4,041,686 + PS417_18605 0.76 +0.3 4,041,761 + PS417_18605 0.85 -2.1 4,041,796 + PS417_18605 0.89 -1.1 4,041,802 - PS417_18605 0.89 -0.1 4,041,802 - PS417_18605 0.89 -1.4 4,041,961 + +0.1 4,041,962 - +0.9 4,042,680 - PS417_18610 0.22 -0.2 4,042,680 - PS417_18610 0.22 +0.7 4,042,882 - PS417_18610 0.28 -0.6
Or see this region's nucleotide sequence