Experiment: Thallium(I) acetate 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_15785 and PS417_15790 are separated by 195 nucleotides PS417_15790 and PS417_15795 are separated by 62 nucleotides PS417_15795 and PS417_15800 are separated by 164 nucleotides PS417_15800 and PS417_15805 overlap by 1 nucleotides
PS417_15785: PS417_15785 - porin, at 3,460,173 to 3,461,489
_15785
PS417_15790: PS417_15790 - hypothetical protein, at 3,461,685 to 3,462,230
_15790
PS417_15795: PS417_15795 - hypothetical protein, at 3,462,293 to 3,462,676
_15795
PS417_15800: PS417_15800 - photosynthetic protein synthase I, at 3,462,841 to 3,463,449
_15800
PS417_15805: PS417_15805 - transporter, at 3,463,449 to 3,463,916
_15805
Position (kb)
3462
3463 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3461.306 kb on - strand, within PS417_15785 at 3461.374 kb on + strand at 3461.374 kb on + strand at 3461.375 kb on - strand at 3461.378 kb on - strand at 3461.587 kb on - strand at 3461.588 kb on + strand at 3461.588 kb on + strand at 3461.588 kb on + strand at 3461.589 kb on - strand at 3461.589 kb on - strand at 3461.589 kb on - strand at 3461.671 kb on + strand at 3461.865 kb on - strand, within PS417_15790 at 3461.971 kb on + strand, within PS417_15790 at 3461.972 kb on - strand, within PS417_15790 at 3461.972 kb on - strand, within PS417_15790 at 3461.972 kb on - strand, within PS417_15790 at 3462.102 kb on + strand, within PS417_15790 at 3462.466 kb on - strand, within PS417_15795 at 3462.630 kb on + strand, within PS417_15795 at 3462.689 kb on - strand at 3462.749 kb on - strand at 3462.749 kb on - strand at 3462.771 kb on - strand at 3462.846 kb on + strand at 3462.846 kb on + strand at 3462.947 kb on - strand, within PS417_15800 at 3462.947 kb on - strand, within PS417_15800 at 3462.982 kb on - strand, within PS417_15800 at 3463.030 kb on + strand, within PS417_15800 at 3463.207 kb on + strand, within PS417_15800 at 3463.207 kb on + strand, within PS417_15800 at 3463.208 kb on - strand, within PS417_15800 at 3463.321 kb on + strand, within PS417_15800 at 3463.322 kb on - strand, within PS417_15800 at 3463.322 kb on - strand, within PS417_15800 at 3463.322 kb on - strand, within PS417_15800 at 3463.322 kb on - strand, within PS417_15800 at 3463.476 kb on - strand at 3463.482 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.0625 mg/ml remove 3,461,306 - PS417_15785 0.86 -1.8 3,461,374 + -1.6 3,461,374 + +1.0 3,461,375 - +0.8 3,461,378 - +0.0 3,461,587 - +0.3 3,461,588 + -0.0 3,461,588 + +1.2 3,461,588 + -0.1 3,461,589 - +0.4 3,461,589 - -0.2 3,461,589 - +0.6 3,461,671 + -1.1 3,461,865 - PS417_15790 0.33 -0.3 3,461,971 + PS417_15790 0.52 +0.3 3,461,972 - PS417_15790 0.53 +0.4 3,461,972 - PS417_15790 0.53 -0.5 3,461,972 - PS417_15790 0.53 +0.1 3,462,102 + PS417_15790 0.76 -1.1 3,462,466 - PS417_15795 0.45 +1.0 3,462,630 + PS417_15795 0.88 -1.0 3,462,689 - +0.3 3,462,749 - -0.1 3,462,749 - -0.8 3,462,771 - +0.3 3,462,846 + +1.1 3,462,846 + +1.1 3,462,947 - PS417_15800 0.17 +1.7 3,462,947 - PS417_15800 0.17 -2.9 3,462,982 - PS417_15800 0.23 +1.9 3,463,030 + PS417_15800 0.31 +0.9 3,463,207 + PS417_15800 0.60 +3.1 3,463,207 + PS417_15800 0.60 +1.9 3,463,208 - PS417_15800 0.60 +1.8 3,463,321 + PS417_15800 0.79 +2.3 3,463,322 - PS417_15800 0.79 +1.0 3,463,322 - PS417_15800 0.79 +1.3 3,463,322 - PS417_15800 0.79 +0.9 3,463,322 - PS417_15800 0.79 -0.2 3,463,476 - +1.7 3,463,482 - +2.2
Or see this region's nucleotide sequence