Strain Fitness in Bosea sp. OAE506 around ABIE41_RS07275

Experiment: L-Arabinose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS07270 and ABIE41_RS07275 are separated by 31 nucleotidesABIE41_RS07275 and ABIE41_RS07280 are separated by 73 nucleotidesABIE41_RS07280 and ABIE41_RS07285 are separated by 276 nucleotides ABIE41_RS07270: ABIE41_RS07270 - cobaltochelatase subunit CobT, at 1,499,056 to 1,500,958 _RS07270 ABIE41_RS07275: ABIE41_RS07275 - esterase-like activity of phytase family protein, at 1,500,990 to 1,501,991 _RS07275 ABIE41_RS07280: ABIE41_RS07280 - 50S ribosomal protein L28, at 1,502,065 to 1,502,352 _RS07280 ABIE41_RS07285: ABIE41_RS07285 - DUF3108 domain-containing protein, at 1,502,629 to 1,503,450 _RS07285 Position (kb) 1500 1501 1502Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 1501.381 kb on - strand, within ABIE41_RS07275at 1501.381 kb on - strand, within ABIE41_RS07275at 1501.383 kb on + strand, within ABIE41_RS07275at 1501.383 kb on + strand, within ABIE41_RS07275at 1501.384 kb on - strand, within ABIE41_RS07275at 1501.384 kb on - strand, within ABIE41_RS07275at 1501.384 kb on - strand, within ABIE41_RS07275at 1501.423 kb on - strand, within ABIE41_RS07275at 1501.423 kb on - strand, within ABIE41_RS07275at 1501.423 kb on - strand, within ABIE41_RS07275at 1501.941 kb on - strandat 1501.941 kb on - strandat 1501.941 kb on - strandat 1502.717 kb on + strand, within ABIE41_RS07285at 1502.717 kb on + strand, within ABIE41_RS07285at 1502.717 kb on + strand, within ABIE41_RS07285at 1502.717 kb on + strand, within ABIE41_RS07285at 1502.718 kb on - strand, within ABIE41_RS07285at 1502.718 kb on - strand, within ABIE41_RS07285at 1502.718 kb on - strand, within ABIE41_RS07285at 1502.797 kb on + strand, within ABIE41_RS07285at 1502.798 kb on - strand, within ABIE41_RS07285at 1502.798 kb on - strand, within ABIE41_RS07285

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arabinose (C)
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1,501,381 - ABIE41_RS07275 0.39 +2.7
1,501,381 - ABIE41_RS07275 0.39 -0.9
1,501,383 + ABIE41_RS07275 0.39 +0.4
1,501,383 + ABIE41_RS07275 0.39 +2.3
1,501,384 - ABIE41_RS07275 0.39 -1.6
1,501,384 - ABIE41_RS07275 0.39 +0.2
1,501,384 - ABIE41_RS07275 0.39 -0.2
1,501,423 - ABIE41_RS07275 0.43 +0.9
1,501,423 - ABIE41_RS07275 0.43 +0.0
1,501,423 - ABIE41_RS07275 0.43 +1.5
1,501,941 - +0.5
1,501,941 - +0.3
1,501,941 - +0.3
1,502,717 + ABIE41_RS07285 0.11 -0.8
1,502,717 + ABIE41_RS07285 0.11 +0.4
1,502,717 + ABIE41_RS07285 0.11 +0.5
1,502,717 + ABIE41_RS07285 0.11 -1.8
1,502,718 - ABIE41_RS07285 0.11 -4.0
1,502,718 - ABIE41_RS07285 0.11 -1.6
1,502,718 - ABIE41_RS07285 0.11 -1.0
1,502,797 + ABIE41_RS07285 0.20 +0.2
1,502,798 - ABIE41_RS07285 0.21 -0.2
1,502,798 - ABIE41_RS07285 0.21 +0.2

Or see this region's nucleotide sequence