Experiment: L-Arabinose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS09445 and ABID97_RS09450 overlap by 4 nucleotides ABID97_RS09450 and ABID97_RS09455 overlap by 1 nucleotides
ABID97_RS09445: ABID97_RS09445 - monovalent cation/H+ antiporter subunit D, at 1,983,390 to 1,985,096
_RS09445
ABID97_RS09450: ABID97_RS09450 - Na+/H+ antiporter subunit C, at 1,985,093 to 1,985,446
_RS09450
ABID97_RS09455: ABID97_RS09455 - monovalent cation/H+ antiporter subunit A, at 1,985,446 to 1,988,388
_RS09455
Position (kb) 1985
1986 Strain fitness (log2 ratio) -1
0
1 at 1984.271 kb on - strand, within ABID97_RS09445 at 1984.271 kb on - strand, within ABID97_RS09445 at 1984.330 kb on + strand, within ABID97_RS09445 at 1984.331 kb on - strand, within ABID97_RS09445 at 1984.493 kb on - strand, within ABID97_RS09445 at 1984.549 kb on + strand, within ABID97_RS09445 at 1984.549 kb on + strand, within ABID97_RS09445 at 1984.550 kb on - strand, within ABID97_RS09445 at 1984.603 kb on + strand, within ABID97_RS09445 at 1984.853 kb on - strand, within ABID97_RS09445 at 1985.394 kb on + strand, within ABID97_RS09450 at 1985.873 kb on + strand, within ABID97_RS09455 at 1985.874 kb on - strand, within ABID97_RS09455 at 1985.874 kb on - strand, within ABID97_RS09455 at 1985.874 kb on - strand, within ABID97_RS09455 at 1985.874 kb on - strand, within ABID97_RS09455 at 1986.065 kb on + strand, within ABID97_RS09455 at 1986.065 kb on + strand, within ABID97_RS09455 at 1986.065 kb on + strand, within ABID97_RS09455 at 1986.065 kb on + strand, within ABID97_RS09455 at 1986.066 kb on - strand, within ABID97_RS09455 at 1986.443 kb on + strand, within ABID97_RS09455 at 1986.443 kb on + strand, within ABID97_RS09455 at 1986.444 kb on - strand, within ABID97_RS09455 at 1986.444 kb on - strand, within ABID97_RS09455 at 1986.444 kb on - strand, within ABID97_RS09455 at 1986.444 kb on - strand, within ABID97_RS09455 at 1986.444 kb on - strand, within ABID97_RS09455 at 1986.444 kb on - strand, within ABID97_RS09455
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arabinose (C) remove 1,984,271 - ABID97_RS09445 0.52 +0.1 1,984,271 - ABID97_RS09445 0.52 +0.2 1,984,330 + ABID97_RS09445 0.55 +0.5 1,984,331 - ABID97_RS09445 0.55 -0.0 1,984,493 - ABID97_RS09445 0.65 -0.6 1,984,549 + ABID97_RS09445 0.68 +0.2 1,984,549 + ABID97_RS09445 0.68 -0.4 1,984,550 - ABID97_RS09445 0.68 -0.7 1,984,603 + ABID97_RS09445 0.71 +0.6 1,984,853 - ABID97_RS09445 0.86 -0.0 1,985,394 + ABID97_RS09450 0.85 +1.0 1,985,873 + ABID97_RS09455 0.15 -0.2 1,985,874 - ABID97_RS09455 0.15 +0.4 1,985,874 - ABID97_RS09455 0.15 +0.1 1,985,874 - ABID97_RS09455 0.15 -0.6 1,985,874 - ABID97_RS09455 0.15 +0.1 1,986,065 + ABID97_RS09455 0.21 +0.6 1,986,065 + ABID97_RS09455 0.21 -0.5 1,986,065 + ABID97_RS09455 0.21 -0.1 1,986,065 + ABID97_RS09455 0.21 -1.0 1,986,066 - ABID97_RS09455 0.21 +0.1 1,986,443 + ABID97_RS09455 0.34 -1.4 1,986,443 + ABID97_RS09455 0.34 +0.2 1,986,444 - ABID97_RS09455 0.34 -0.4 1,986,444 - ABID97_RS09455 0.34 +0.6 1,986,444 - ABID97_RS09455 0.34 -0.3 1,986,444 - ABID97_RS09455 0.34 +1.3 1,986,444 - ABID97_RS09455 0.34 +0.4 1,986,444 - ABID97_RS09455 0.34 -1.1
Or see this region's nucleotide sequence