Experiment: L-Arabinose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS04050 and ABID97_RS04055 are separated by 73 nucleotides ABID97_RS04055 and ABID97_RS04060 are separated by 204 nucleotides
ABID97_RS04050: ABID97_RS04050 - ABC transporter permease, at 830,587 to 831,447
_RS04050
ABID97_RS04055: ABID97_RS04055 - ABC transporter ATP-binding protein, at 831,521 to 832,609
_RS04055
ABID97_RS04060: ABID97_RS04060 - IclR family transcriptional regulator, at 832,814 to 833,672
_RS04060
Position (kb) 831
832
833 Strain fitness (log2 ratio) -2
-1
0
1
2 at 830.553 kb on + strand at 830.607 kb on - strand at 830.630 kb on + strand at 830.631 kb on - strand at 830.720 kb on + strand, within ABID97_RS04050 at 830.999 kb on + strand, within ABID97_RS04050 at 830.999 kb on + strand, within ABID97_RS04050 at 831.174 kb on - strand, within ABID97_RS04050 at 831.254 kb on + strand, within ABID97_RS04050 at 831.258 kb on - strand, within ABID97_RS04050 at 831.281 kb on + strand, within ABID97_RS04050 at 831.329 kb on + strand, within ABID97_RS04050 at 831.330 kb on - strand, within ABID97_RS04050 at 831.945 kb on + strand, within ABID97_RS04055 at 831.945 kb on + strand, within ABID97_RS04055 at 831.945 kb on + strand, within ABID97_RS04055 at 831.945 kb on + strand, within ABID97_RS04055 at 831.946 kb on - strand, within ABID97_RS04055 at 832.359 kb on + strand, within ABID97_RS04055 at 832.360 kb on - strand, within ABID97_RS04055 at 832.573 kb on - strand at 832.598 kb on + strand at 832.692 kb on + strand at 832.723 kb on + strand at 832.744 kb on + strand at 832.771 kb on - strand at 833.329 kb on - strand, within ABID97_RS04060 at 833.337 kb on + strand, within ABID97_RS04060 at 833.338 kb on - strand, within ABID97_RS04060 at 833.338 kb on - strand, within ABID97_RS04060 at 833.349 kb on + strand, within ABID97_RS04060 at 833.350 kb on - strand, within ABID97_RS04060 at 833.350 kb on - strand, within ABID97_RS04060 at 833.350 kb on - strand, within ABID97_RS04060
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arabinose (C) remove 830,553 + -0.4 830,607 - +0.6 830,630 + -0.2 830,631 - +0.3 830,720 + ABID97_RS04050 0.15 -1.4 830,999 + ABID97_RS04050 0.48 +1.5 830,999 + ABID97_RS04050 0.48 -0.4 831,174 - ABID97_RS04050 0.68 -0.4 831,254 + ABID97_RS04050 0.77 -0.1 831,258 - ABID97_RS04050 0.78 -0.8 831,281 + ABID97_RS04050 0.81 -0.2 831,329 + ABID97_RS04050 0.86 +0.1 831,330 - ABID97_RS04050 0.86 +0.5 831,945 + ABID97_RS04055 0.39 -0.5 831,945 + ABID97_RS04055 0.39 -0.1 831,945 + ABID97_RS04055 0.39 -1.8 831,945 + ABID97_RS04055 0.39 -0.4 831,946 - ABID97_RS04055 0.39 -0.1 832,359 + ABID97_RS04055 0.77 +2.0 832,360 - ABID97_RS04055 0.77 +0.2 832,573 - -0.9 832,598 + -0.2 832,692 + +0.3 832,723 + -1.0 832,744 + +0.2 832,771 - -1.7 833,329 - ABID97_RS04060 0.60 -0.3 833,337 + ABID97_RS04060 0.61 -0.4 833,338 - ABID97_RS04060 0.61 -0.8 833,338 - ABID97_RS04060 0.61 +2.5 833,349 + ABID97_RS04060 0.62 +0.6 833,350 - ABID97_RS04060 0.62 +0.8 833,350 - ABID97_RS04060 0.62 +0.5 833,350 - ABID97_RS04060 0.62 +0.0
Or see this region's nucleotide sequence