Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_5095 and PfGW456L13_5096 are separated by 105 nucleotides PfGW456L13_5096 and PfGW456L13_5097 are separated by 9 nucleotides PfGW456L13_5097 and PfGW456L13_5098 are separated by 28 nucleotides PfGW456L13_5098 and PfGW456L13_5099 are separated by 17 nucleotides
PfGW456L13_5095 - Heat shock protein FtsJ/RrmJ @ Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-), at 5,685,824 to 5,686,456
_5095
PfGW456L13_5096 - FIG004454: RNA binding protein, at 5,686,562 to 5,686,870
_5096
PfGW456L13_5097 - hypothetical protein, at 5,686,880 to 5,687,284
_5097
PfGW456L13_5098 - Transcription elongation factor GreA, at 5,687,313 to 5,687,774
_5098
PfGW456L13_5099 - Carbamoyl-phosphate synthase large chain (EC 6.3.5.5), at 5,687,792 to 5,691,013
_5099
Position (kb) 5686
5687
5688 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5686.536 kb on - strand at 5686.536 kb on - strand at 5686.562 kb on - strand at 5686.593 kb on - strand, within PfGW456L13_5096 at 5686.593 kb on - strand, within PfGW456L13_5096 at 5686.627 kb on - strand, within PfGW456L13_5096 at 5686.627 kb on - strand, within PfGW456L13_5096 at 5686.627 kb on - strand, within PfGW456L13_5096 at 5686.948 kb on + strand, within PfGW456L13_5097 at 5686.948 kb on + strand, within PfGW456L13_5097 at 5686.949 kb on - strand, within PfGW456L13_5097 at 5686.966 kb on - strand, within PfGW456L13_5097 at 5686.966 kb on - strand, within PfGW456L13_5097 at 5686.966 kb on - strand, within PfGW456L13_5097 at 5686.966 kb on - strand, within PfGW456L13_5097 at 5686.966 kb on - strand, within PfGW456L13_5097 at 5687.019 kb on + strand, within PfGW456L13_5097 at 5687.019 kb on + strand, within PfGW456L13_5097 at 5687.019 kb on + strand, within PfGW456L13_5097 at 5687.019 kb on + strand, within PfGW456L13_5097 at 5687.019 kb on + strand, within PfGW456L13_5097 at 5687.020 kb on - strand, within PfGW456L13_5097 at 5687.034 kb on + strand, within PfGW456L13_5097 at 5687.034 kb on + strand, within PfGW456L13_5097 at 5687.034 kb on + strand, within PfGW456L13_5097 at 5687.035 kb on - strand, within PfGW456L13_5097 at 5687.035 kb on - strand, within PfGW456L13_5097 at 5687.035 kb on - strand, within PfGW456L13_5097 at 5687.035 kb on - strand, within PfGW456L13_5097 at 5687.035 kb on - strand, within PfGW456L13_5097 at 5687.035 kb on - strand, within PfGW456L13_5097 at 5687.075 kb on + strand, within PfGW456L13_5097 at 5687.076 kb on - strand, within PfGW456L13_5097 at 5687.120 kb on + strand, within PfGW456L13_5097 at 5687.121 kb on - strand, within PfGW456L13_5097 at 5687.147 kb on + strand, within PfGW456L13_5097 at 5687.814 kb on - strand at 5687.814 kb on - strand at 5687.814 kb on - strand at 5687.814 kb on - strand at 5687.832 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 5,686,536 - -1.0 5,686,536 - -0.4 5,686,562 - -2.5 5,686,593 - PfGW456L13_5096 0.10 -2.2 5,686,593 - PfGW456L13_5096 0.10 -1.2 5,686,627 - PfGW456L13_5096 0.21 -0.7 5,686,627 - PfGW456L13_5096 0.21 -1.5 5,686,627 - PfGW456L13_5096 0.21 -0.4 5,686,948 + PfGW456L13_5097 0.17 +0.1 5,686,948 + PfGW456L13_5097 0.17 -0.8 5,686,949 - PfGW456L13_5097 0.17 +1.5 5,686,966 - PfGW456L13_5097 0.21 +2.1 5,686,966 - PfGW456L13_5097 0.21 -0.3 5,686,966 - PfGW456L13_5097 0.21 +0.3 5,686,966 - PfGW456L13_5097 0.21 +0.1 5,686,966 - PfGW456L13_5097 0.21 +1.5 5,687,019 + PfGW456L13_5097 0.34 -0.0 5,687,019 + PfGW456L13_5097 0.34 -1.2 5,687,019 + PfGW456L13_5097 0.34 +1.5 5,687,019 + PfGW456L13_5097 0.34 -0.1 5,687,019 + PfGW456L13_5097 0.34 +1.3 5,687,020 - PfGW456L13_5097 0.35 +0.6 5,687,034 + PfGW456L13_5097 0.38 -0.1 5,687,034 + PfGW456L13_5097 0.38 +1.6 5,687,034 + PfGW456L13_5097 0.38 -2.0 5,687,035 - PfGW456L13_5097 0.38 -0.8 5,687,035 - PfGW456L13_5097 0.38 -0.4 5,687,035 - PfGW456L13_5097 0.38 +0.5 5,687,035 - PfGW456L13_5097 0.38 -0.8 5,687,035 - PfGW456L13_5097 0.38 +1.9 5,687,035 - PfGW456L13_5097 0.38 -0.5 5,687,075 + PfGW456L13_5097 0.48 +1.2 5,687,076 - PfGW456L13_5097 0.48 -0.3 5,687,120 + PfGW456L13_5097 0.59 -1.1 5,687,121 - PfGW456L13_5097 0.60 -0.3 5,687,147 + PfGW456L13_5097 0.66 -2.6 5,687,814 - -0.5 5,687,814 - +0.9 5,687,814 - +0.4 5,687,814 - +0.7 5,687,832 - -1.4
Or see this region's nucleotide sequence