Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4432 and PfGW456L13_4433 are separated by 144 nucleotides PfGW456L13_4433 and PfGW456L13_4434 are separated by 5 nucleotides
PfGW456L13_4432 - HlyD family secretion protein, at 4,955,320 to 4,956,675
_4432
PfGW456L13_4433 - FIG00955751: hypothetical protein, at 4,956,820 to 4,957,416
_4433
PfGW456L13_4434 - Transcriptional regulator GbuR, at 4,957,422 to 4,958,315
_4434
Position (kb)
4956
4957
4958 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4955.864 kb on + strand, within PfGW456L13_4432 at 4955.864 kb on + strand, within PfGW456L13_4432 at 4955.886 kb on - strand, within PfGW456L13_4432 at 4956.354 kb on - strand, within PfGW456L13_4432 at 4956.415 kb on + strand, within PfGW456L13_4432 at 4956.416 kb on - strand, within PfGW456L13_4432 at 4956.416 kb on - strand, within PfGW456L13_4432 at 4956.421 kb on + strand, within PfGW456L13_4432 at 4956.421 kb on + strand, within PfGW456L13_4432 at 4956.421 kb on + strand, within PfGW456L13_4432 at 4956.421 kb on + strand, within PfGW456L13_4432 at 4956.422 kb on - strand, within PfGW456L13_4432 at 4956.422 kb on - strand, within PfGW456L13_4432 at 4956.431 kb on - strand, within PfGW456L13_4432 at 4956.502 kb on + strand at 4956.503 kb on - strand, within PfGW456L13_4432 at 4956.595 kb on - strand at 4956.595 kb on - strand at 4956.595 kb on - strand at 4956.595 kb on - strand at 4956.598 kb on - strand at 4956.622 kb on + strand at 4956.623 kb on - strand at 4956.674 kb on - strand at 4956.681 kb on - strand at 4956.748 kb on + strand at 4956.749 kb on - strand at 4956.837 kb on + strand at 4956.837 kb on + strand at 4956.837 kb on + strand at 4956.837 kb on + strand at 4956.837 kb on + strand at 4956.838 kb on - strand at 4956.838 kb on - strand at 4956.838 kb on - strand at 4956.838 kb on - strand at 4957.096 kb on - strand, within PfGW456L13_4433 at 4957.327 kb on + strand, within PfGW456L13_4433 at 4957.423 kb on + strand at 4957.424 kb on - strand at 4957.445 kb on + strand at 4957.445 kb on + strand at 4957.523 kb on - strand, within PfGW456L13_4434 at 4957.582 kb on + strand, within PfGW456L13_4434 at 4957.583 kb on - strand, within PfGW456L13_4434 at 4957.583 kb on - strand, within PfGW456L13_4434 at 4957.606 kb on + strand, within PfGW456L13_4434 at 4957.607 kb on - strand, within PfGW456L13_4434 at 4957.643 kb on + strand, within PfGW456L13_4434 at 4957.644 kb on - strand, within PfGW456L13_4434 at 4957.644 kb on - strand, within PfGW456L13_4434 at 4957.789 kb on + strand, within PfGW456L13_4434 at 4957.789 kb on + strand, within PfGW456L13_4434 at 4957.789 kb on + strand, within PfGW456L13_4434 at 4957.789 kb on + strand, within PfGW456L13_4434 at 4957.789 kb on + strand, within PfGW456L13_4434 at 4957.789 kb on + strand, within PfGW456L13_4434 at 4957.790 kb on - strand, within PfGW456L13_4434 at 4957.790 kb on - strand, within PfGW456L13_4434 at 4957.790 kb on - strand, within PfGW456L13_4434 at 4957.822 kb on + strand, within PfGW456L13_4434 at 4957.822 kb on + strand, within PfGW456L13_4434 at 4957.822 kb on + strand, within PfGW456L13_4434 at 4957.823 kb on - strand, within PfGW456L13_4434 at 4957.823 kb on - strand, within PfGW456L13_4434 at 4957.823 kb on - strand, within PfGW456L13_4434 at 4957.823 kb on - strand, within PfGW456L13_4434 at 4957.823 kb on - strand, within PfGW456L13_4434 at 4957.823 kb on - strand, within PfGW456L13_4434 at 4957.954 kb on + strand, within PfGW456L13_4434 at 4957.955 kb on - strand, within PfGW456L13_4434 at 4958.059 kb on + strand, within PfGW456L13_4434 at 4958.060 kb on - strand, within PfGW456L13_4434 at 4958.126 kb on + strand, within PfGW456L13_4434 at 4958.126 kb on + strand at 4958.127 kb on - strand, within PfGW456L13_4434 at 4958.127 kb on - strand, within PfGW456L13_4434 at 4958.197 kb on + strand, within PfGW456L13_4434 at 4958.197 kb on + strand, within PfGW456L13_4434 at 4958.197 kb on + strand, within PfGW456L13_4434 at 4958.197 kb on + strand, within PfGW456L13_4434 at 4958.197 kb on + strand, within PfGW456L13_4434 at 4958.197 kb on + strand, within PfGW456L13_4434 at 4958.197 kb on + strand, within PfGW456L13_4434 at 4958.198 kb on - strand, within PfGW456L13_4434 at 4958.198 kb on - strand, within PfGW456L13_4434 at 4958.198 kb on - strand, within PfGW456L13_4434 at 4958.198 kb on - strand, within PfGW456L13_4434 at 4958.286 kb on + strand at 4958.287 kb on - strand at 4958.287 kb on - strand at 4958.287 kb on - strand at 4958.287 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 4,955,864 + PfGW456L13_4432 0.40 -0.5 4,955,864 + PfGW456L13_4432 0.40 -0.3 4,955,886 - PfGW456L13_4432 0.42 -1.7 4,956,354 - PfGW456L13_4432 0.76 +0.2 4,956,415 + PfGW456L13_4432 0.81 +0.1 4,956,416 - PfGW456L13_4432 0.81 +1.5 4,956,416 - PfGW456L13_4432 0.81 -1.4 4,956,421 + PfGW456L13_4432 0.81 -0.1 4,956,421 + PfGW456L13_4432 0.81 +0.3 4,956,421 + PfGW456L13_4432 0.81 +0.7 4,956,421 + PfGW456L13_4432 0.81 -0.4 4,956,422 - PfGW456L13_4432 0.81 -0.4 4,956,422 - PfGW456L13_4432 0.81 +0.2 4,956,431 - PfGW456L13_4432 0.82 -3.1 4,956,502 + +1.6 4,956,503 - PfGW456L13_4432 0.87 -0.4 4,956,595 - +1.1 4,956,595 - +0.0 4,956,595 - +0.5 4,956,595 - -1.4 4,956,598 - -1.7 4,956,622 + +3.2 4,956,623 - +1.9 4,956,674 - -1.7 4,956,681 - -0.9 4,956,748 + -0.9 4,956,749 - -0.7 4,956,837 + -1.2 4,956,837 + +0.6 4,956,837 + +1.2 4,956,837 + -2.6 4,956,837 + -1.5 4,956,838 - -1.1 4,956,838 - +1.0 4,956,838 - +0.7 4,956,838 - +1.2 4,957,096 - PfGW456L13_4433 0.46 +1.9 4,957,327 + PfGW456L13_4433 0.85 +1.7 4,957,423 + +0.8 4,957,424 - -0.6 4,957,445 + -1.0 4,957,445 + +0.5 4,957,523 - PfGW456L13_4434 0.11 -1.8 4,957,582 + PfGW456L13_4434 0.18 +1.1 4,957,583 - PfGW456L13_4434 0.18 +0.1 4,957,583 - PfGW456L13_4434 0.18 +0.9 4,957,606 + PfGW456L13_4434 0.21 +0.0 4,957,607 - PfGW456L13_4434 0.21 -1.2 4,957,643 + PfGW456L13_4434 0.25 +1.1 4,957,644 - PfGW456L13_4434 0.25 -1.4 4,957,644 - PfGW456L13_4434 0.25 +0.0 4,957,789 + PfGW456L13_4434 0.41 -0.8 4,957,789 + PfGW456L13_4434 0.41 +1.4 4,957,789 + PfGW456L13_4434 0.41 -2.6 4,957,789 + PfGW456L13_4434 0.41 -0.7 4,957,789 + PfGW456L13_4434 0.41 +0.5 4,957,789 + PfGW456L13_4434 0.41 +1.8 4,957,790 - PfGW456L13_4434 0.41 -0.0 4,957,790 - PfGW456L13_4434 0.41 -1.4 4,957,790 - PfGW456L13_4434 0.41 -1.1 4,957,822 + PfGW456L13_4434 0.45 -0.0 4,957,822 + PfGW456L13_4434 0.45 +1.4 4,957,822 + PfGW456L13_4434 0.45 +0.2 4,957,823 - PfGW456L13_4434 0.45 -0.8 4,957,823 - PfGW456L13_4434 0.45 +0.8 4,957,823 - PfGW456L13_4434 0.45 -0.5 4,957,823 - PfGW456L13_4434 0.45 -0.1 4,957,823 - PfGW456L13_4434 0.45 +0.4 4,957,823 - PfGW456L13_4434 0.45 +0.6 4,957,954 + PfGW456L13_4434 0.60 -2.4 4,957,955 - PfGW456L13_4434 0.60 -2.3 4,958,059 + PfGW456L13_4434 0.71 -1.5 4,958,060 - PfGW456L13_4434 0.71 -1.5 4,958,126 + PfGW456L13_4434 0.79 +0.7 4,958,126 + +1.2 4,958,127 - PfGW456L13_4434 0.79 +1.0 4,958,127 - PfGW456L13_4434 0.79 +0.9 4,958,197 + PfGW456L13_4434 0.87 -2.8 4,958,197 + PfGW456L13_4434 0.87 +1.0 4,958,197 + PfGW456L13_4434 0.87 -0.1 4,958,197 + PfGW456L13_4434 0.87 -1.9 4,958,197 + PfGW456L13_4434 0.87 +1.2 4,958,197 + PfGW456L13_4434 0.87 +0.6 4,958,197 + PfGW456L13_4434 0.87 +1.1 4,958,198 - PfGW456L13_4434 0.87 +0.6 4,958,198 - PfGW456L13_4434 0.87 +0.4 4,958,198 - PfGW456L13_4434 0.87 +1.1 4,958,198 - PfGW456L13_4434 0.87 -0.2 4,958,286 + -1.1 4,958,287 - -2.3 4,958,287 - -0.4 4,958,287 - -1.2 4,958,287 - -1.5
Or see this region's nucleotide sequence