Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2017

Experiment: D-Fructose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Fructose (C)
2,220,112	+		PfGW456L13_2016	0.38	+1.3
2,220,112	+		PfGW456L13_2016	0.38	+2.1
2,220,283	+		PfGW456L13_2016	0.51	+0.2
2,220,283	+		PfGW456L13_2016	0.51	-1.6
2,220,283	+		PfGW456L13_2016	0.51	-1.0
2,220,283	+		PfGW456L13_2016	0.51	-0.8
2,220,284	-		PfGW456L13_2016	0.51	-0.3
2,220,284	-		PfGW456L13_2016	0.51	+0.8
2,220,284	-		PfGW456L13_2016	0.51	-0.9
2,220,314	+		PfGW456L13_2016	0.54	-0.8
2,220,315	-		PfGW456L13_2016	0.54	-0.3
2,220,367	+		PfGW456L13_2016	0.58	-3.0
2,220,367	+		PfGW456L13_2016	0.58	+0.3
2,220,516	+		PfGW456L13_2016	0.69	+2.3
2,220,516	+		PfGW456L13_2016	0.69	-0.3
2,220,517	-		PfGW456L13_2016	0.69	+1.5
2,220,517	-		PfGW456L13_2016	0.69	-0.3
2,220,517	-		PfGW456L13_2016	0.69	-0.8
2,220,527	-		PfGW456L13_2016	0.70	-0.4
2,220,864	+				+1.1
2,220,864	+				+0.1
2,220,884	+				-0.6
2,220,884	+				+1.3
2,220,885	-				-2.1
2,220,931	+				-2.3
2,220,931	+				-2.4
2,220,931	+				+0.8
2,220,931	+				-0.3
2,220,931	+				-1.2
2,220,932	-				-0.0
2,220,932	-				+0.5
2,220,932	-				+1.4
2,220,932	-				-0.5
2,221,059	+				+0.5
2,221,059	+				-0.2
2,221,059	+				-2.8
2,221,060	-				-0.1
2,221,060	-				-1.0
2,221,060	-				-0.6
2,221,089	+				+0.1
2,221,089	+				+1.1
2,221,089	+				-0.7
2,221,089	+				+0.7
2,221,089	+				+1.0
2,221,089	+				-1.0
2,221,089	+				-0.3
2,221,089	+				-0.9
2,221,089	+				-0.2
2,221,089	+				-0.5
2,221,090	-				+0.9
2,221,090	-				+1.5
2,221,090	-				-0.2
2,221,090	-				-2.0
2,221,090	-				-2.3
2,221,090	-				+0.1
2,221,090	-				+0.3
2,221,090	-				+1.1
2,221,270	+		PfGW456L13_2017	0.15	-2.6
2,221,271	-		PfGW456L13_2017	0.15	+0.2
2,221,271	-		PfGW456L13_2017	0.15	+0.1
2,221,271	-		PfGW456L13_2017	0.15	+0.9
2,221,447	+		PfGW456L13_2017	0.30	-0.0
2,221,447	+		PfGW456L13_2017	0.30	-0.2
2,221,447	+		PfGW456L13_2017	0.30	-2.2
2,221,447	+		PfGW456L13_2017	0.30	-0.4
2,221,448	-		PfGW456L13_2017	0.30	-0.0
2,221,448	-		PfGW456L13_2017	0.30	+0.9
2,221,448	-		PfGW456L13_2017	0.30	+0.7
2,221,448	-		PfGW456L13_2017	0.30	-1.2
2,221,448	-		PfGW456L13_2017	0.30	-2.5
2,221,448	-		PfGW456L13_2017	0.30	-0.3
2,221,448	-		PfGW456L13_2017	0.30	+0.6
2,221,465	+		PfGW456L13_2017	0.32	+1.6
2,221,483	+		PfGW456L13_2017	0.33	-1.8
2,221,483	+		PfGW456L13_2017	0.33	-1.0
2,221,513	+		PfGW456L13_2017	0.36	+0.7
2,221,514	-		PfGW456L13_2017	0.36	+1.2
2,221,514	-		PfGW456L13_2017	0.36	-0.0
2,221,540	+		PfGW456L13_2017	0.38	-0.7
2,221,541	-		PfGW456L13_2017	0.38	-2.0
2,221,732	+		PfGW456L13_2017	0.54	-1.0
2,221,792	+		PfGW456L13_2017	0.59	-1.0
2,221,793	-		PfGW456L13_2017	0.59	-1.3
2,221,798	+		PfGW456L13_2017	0.60	+1.3
2,221,799	-		PfGW456L13_2017	0.60	-1.2
2,221,799	-		PfGW456L13_2017	0.60	-1.1
2,221,799	-		PfGW456L13_2017	0.60	+0.3
2,221,939	-		PfGW456L13_2017	0.72	+0.8
2,222,090	+		PfGW456L13_2017	0.85	-0.0
2,222,090	+		PfGW456L13_2017	0.85	+0.1
2,222,090	+		PfGW456L13_2017	0.85	-2.7
2,222,169	+				-2.2
2,222,193	+				+0.8
2,222,194	-				+0.4
2,222,394	-				+0.3
2,222,427	+				+0.3
2,222,427	+				-2.7
2,222,427	+				+0.2
2,222,427	+				+0.5
2,222,427	+				-0.3
2,222,427	+				-2.8
2,222,427	+				+0.7
2,222,427	+				+0.9
2,222,428	-				+0.7
2,222,428	-				+0.5
2,222,428	-				+0.2
2,222,428	-				-1.4
2,222,450	+		PfGW456L13_2018	0.12	+1.1
2,222,450	+		PfGW456L13_2018	0.12	+1.3
2,222,451	-		PfGW456L13_2018	0.12	-0.5
2,222,525	+		PfGW456L13_2018	0.27	-0.2
2,222,525	+		PfGW456L13_2018	0.27	+1.6
2,222,525	+		PfGW456L13_2018	0.27	+0.4
2,222,525	+		PfGW456L13_2018	0.27	+1.5
2,222,525	+		PfGW456L13_2018	0.27	+2.0
2,222,525	+		PfGW456L13_2018	0.27	-0.9
2,222,525	+		PfGW456L13_2018	0.27	-0.8
2,222,526	-		PfGW456L13_2018	0.27	-2.4
2,222,526	-		PfGW456L13_2018	0.27	+0.3
2,222,526	-		PfGW456L13_2018	0.27	-1.6
2,222,526	-		PfGW456L13_2018	0.27	+0.8
2,222,526	-		PfGW456L13_2018	0.27	+0.4
2,222,526	-		PfGW456L13_2018	0.27	+1.1
2,222,526	-		PfGW456L13_2018	0.27	-0.7
2,222,526	-		PfGW456L13_2018	0.27	-0.6
2,222,526	-		PfGW456L13_2018	0.27	-0.3
2,222,531	+		PfGW456L13_2018	0.28	+0.7
2,222,531	+		PfGW456L13_2018	0.28	-0.3
2,222,532	-		PfGW456L13_2018	0.28	-0.5
2,222,532	-		PfGW456L13_2018	0.28	+0.4
2,222,561	+		PfGW456L13_2018	0.34	-0.9
2,222,561	+		PfGW456L13_2018	0.34	+1.3
2,222,561	+		PfGW456L13_2018	0.34	-0.2
2,222,561	+		PfGW456L13_2018	0.34	+0.4
2,222,561	+		PfGW456L13_2018	0.34	+0.1
2,222,561	+		PfGW456L13_2018	0.34	-0.8
2,222,561	+		PfGW456L13_2018	0.34	+1.0
2,222,562	-		PfGW456L13_2018	0.34	-2.0
2,222,562	-		PfGW456L13_2018	0.34	+2.1
2,222,562	-		PfGW456L13_2018	0.34	+0.2
2,222,562	-		PfGW456L13_2018	0.34	+0.7
2,222,562	-		PfGW456L13_2018	0.34	+0.3
2,222,562	-		PfGW456L13_2018	0.34	+0.4
2,222,562	-		PfGW456L13_2018	0.34	+2.2
2,222,562	-		PfGW456L13_2018	0.34	+1.3
2,222,562	-		PfGW456L13_2018	0.34	-0.2
2,222,591	+		PfGW456L13_2018	0.40	+1.0
2,222,591	+		PfGW456L13_2018	0.40	+1.1
2,222,591	+		PfGW456L13_2018	0.40	+0.2
2,222,591	+		PfGW456L13_2018	0.40	-2.8
2,222,592	-		PfGW456L13_2018	0.40	-0.2
2,222,592	-		PfGW456L13_2018	0.40	-0.8
2,222,592	-		PfGW456L13_2018	0.40	-0.4
2,222,713	-		PfGW456L13_2018	0.65	-2.5
2,222,843	-				-1.5
2,222,869	-				+0.6
2,222,914	+				-0.5
2,223,054	+				-1.1
2,223,054	+				+0.4
2,223,054	+				+0.1
2,223,054	+				+1.8
2,223,055	-				+0.9
2,223,086	+				+0.6
2,223,086	+				-1.0
2,223,086	+				+0.2
2,223,086	+				-0.7
2,223,087	-				+0.2
2,223,087	-				+0.1
2,223,087	-				-1.2
2,223,087	-				+0.9
2,223,087	-				-2.2
2,223,087	-				-0.6
2,223,087	-				+0.8
2,223,198	+		PfGW456L13_2019	0.26	+0.3
2,223,198	+		PfGW456L13_2019	0.26	-0.8
2,223,198	+		PfGW456L13_2019	0.26	+1.2
2,223,198	+		PfGW456L13_2019	0.26	-0.9
2,223,198	+		PfGW456L13_2019	0.26	-0.4
2,223,198	+		PfGW456L13_2019	0.26	+0.5
2,223,198	+		PfGW456L13_2019	0.26	-1.5
2,223,198	+		PfGW456L13_2019	0.26	+0.4
2,223,198	+		PfGW456L13_2019	0.26	+1.2
2,223,198	+		PfGW456L13_2019	0.26	+0.1
2,223,198	+		PfGW456L13_2019	0.26	+0.2
2,223,199	-		PfGW456L13_2019	0.26	-1.4
2,223,199	-		PfGW456L13_2019	0.26	-3.2
2,223,199	-		PfGW456L13_2019	0.26	+0.1
2,223,199	-		PfGW456L13_2019	0.26	+0.4
2,223,199	-		PfGW456L13_2019	0.26	+0.2
2,223,207	+		PfGW456L13_2019	0.27	-1.4
2,223,207	+		PfGW456L13_2019	0.27	-0.4
2,223,207	+		PfGW456L13_2019	0.27	+0.2
2,223,208	-		PfGW456L13_2019	0.27	+1.4
2,223,208	-		PfGW456L13_2019	0.27	+0.1
2,223,208	-		PfGW456L13_2019	0.27	-0.5
2,223,208	-		PfGW456L13_2019	0.27	+1.1
2,223,216	+		PfGW456L13_2019	0.29	-1.6
2,223,217	-		PfGW456L13_2019	0.29	-1.9
2,223,217	-		PfGW456L13_2019	0.29	+1.7
2,223,264	+		PfGW456L13_2019	0.36	-2.5