Strain Fitness in Pseudomonas sp. RS175 around PFR28_02192

Experiment: D-Glucose carbon 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose carbon 10 mM
2,514,020	+		PFR28_02191	0.12	+0.8
2,514,021	-		PFR28_02191	0.12	-0.1
2,514,021	-		PFR28_02191	0.12	+0.4
2,514,021	-		PFR28_02191	0.12	-0.1
2,514,056	+		PFR28_02191	0.16	-0.5
2,514,057	-		PFR28_02191	0.16	-0.0
2,514,057	-		PFR28_02191	0.16	+1.0
2,514,057	-		PFR28_02191	0.16	+0.2
2,514,057	-		PFR28_02191	0.16	+1.5
2,514,140	-		PFR28_02191	0.27	+0.5
2,514,156	+		PFR28_02191	0.29	-0.2
2,514,157	-		PFR28_02191	0.29	+0.6
2,514,158	+		PFR28_02191	0.29	-0.0
2,514,159	-		PFR28_02191	0.29	-0.2
2,514,159	-		PFR28_02191	0.29	+0.4
2,514,208	-		PFR28_02191	0.35	-0.5
2,514,216	+		PFR28_02191	0.36	+0.2
2,514,216	+		PFR28_02191	0.36	+0.9
2,514,216	+		PFR28_02191	0.36	+0.4
2,514,216	+		PFR28_02191	0.36	+0.1
2,514,216	+		PFR28_02191	0.36	-0.5
2,514,217	-		PFR28_02191	0.36	-0.5
2,514,217	-		PFR28_02191	0.36	+0.6
2,514,217	-		PFR28_02191	0.36	-0.5
2,514,218	+		PFR28_02191	0.36	-0.8
2,514,219	-		PFR28_02191	0.36	-0.2
2,514,219	-		PFR28_02191	0.36	-0.6
2,514,219	-		PFR28_02191	0.36	+0.0
2,514,338	+		PFR28_02191	0.51	+1.0
2,514,339	-		PFR28_02191	0.51	-0.6
2,514,386	+		PFR28_02191	0.57	+0.2
2,514,387	-		PFR28_02191	0.57	-1.8
2,514,387	-		PFR28_02191	0.57	-1.0
2,514,574	+		PFR28_02191	0.80	+0.5
2,514,574	+		PFR28_02191	0.80	-0.2
2,514,773	+				+0.4
2,514,773	+				+1.8
2,514,773	+				+1.5
2,514,773	+				+0.7
2,514,774	-				+0.3
2,514,774	-				+0.3
2,514,774	-				-0.2
2,514,775	+				-0.2
2,514,776	-				+0.0
2,514,776	-				-0.2
2,514,798	+				+0.2
2,514,983	+				-0.0
2,514,983	+				+1.2
2,514,984	-				-1.8
2,515,021	+				-1.4
2,515,021	+				+0.1
2,515,021	+				-0.5
2,515,186	+		PFR28_02192	0.11	-1.1
2,515,186	+		PFR28_02192	0.11	+0.1
2,515,186	+		PFR28_02192	0.11	-0.7
2,515,187	-		PFR28_02192	0.11	+1.6
2,515,282	+		PFR28_02192	0.18	+0.3
2,515,282	+		PFR28_02192	0.18	+0.0
2,515,282	+		PFR28_02192	0.18	+0.0
2,515,283	-		PFR28_02192	0.18	+0.2
2,515,283	-		PFR28_02192	0.18	+0.5
2,515,346	-		PFR28_02192	0.22	+0.2
2,515,459	+		PFR28_02192	0.30	+0.2
2,515,459	+		PFR28_02192	0.30	+0.7
2,515,459	+		PFR28_02192	0.30	+0.5
2,515,459	+		PFR28_02192	0.30	-0.1
2,515,459	+		PFR28_02192	0.30	-1.0
2,515,460	-		PFR28_02192	0.30	+0.3
2,515,460	-		PFR28_02192	0.30	-0.0
2,515,460	-		PFR28_02192	0.30	+0.4
2,515,463	+		PFR28_02192	0.30	-0.7
2,515,463	+		PFR28_02192	0.30	+1.4
2,515,463	+		PFR28_02192	0.30	+0.6
2,515,463	+		PFR28_02192	0.30	-0.5
2,515,463	+		PFR28_02192	0.30	+0.4
2,515,464	-		PFR28_02192	0.30	+0.3
2,515,464	-		PFR28_02192	0.30	+0.6
2,515,464	-		PFR28_02192	0.30	-0.0
2,515,472	+		PFR28_02192	0.31	+0.3
2,515,473	-		PFR28_02192	0.31	-2.0
2,515,473	-		PFR28_02192	0.31	-0.2
2,515,474	+		PFR28_02192	0.31	+0.2
2,515,475	-		PFR28_02192	0.31	+0.1
2,515,510	+		PFR28_02192	0.33	+0.4
2,515,511	-		PFR28_02192	0.33	+0.1
2,515,511	-		PFR28_02192	0.33	-0.2
2,515,900	+		PFR28_02192	0.60	-1.2
2,515,900	+		PFR28_02192	0.60	-2.0
2,515,900	+		PFR28_02192	0.60	-0.1
2,515,900	+		PFR28_02192	0.60	+1.6
2,515,901	-		PFR28_02192	0.60	+0.3
2,515,901	-		PFR28_02192	0.60	+2.7
2,515,901	-		PFR28_02192	0.60	+0.6
2,515,954	+		PFR28_02192	0.63	+0.2
2,515,954	+		PFR28_02192	0.63	+1.3
2,515,954	+		PFR28_02192	0.63	-0.4
2,515,954	+		PFR28_02192	0.63	+0.8
2,515,955	-		PFR28_02192	0.63	+1.2
2,516,047	+		PFR28_02192	0.70	+0.2
2,516,047	+		PFR28_02192	0.70	-0.0
2,516,047	+		PFR28_02192	0.70	+0.2
2,516,048	-		PFR28_02192	0.70	-1.2
2,516,048	-		PFR28_02192	0.70	+0.6
2,516,048	-		PFR28_02192	0.70	-0.7
2,516,048	-		PFR28_02192	0.70	+1.6
2,516,048	-		PFR28_02192	0.70	-1.4
2,516,048	-		PFR28_02192	0.70	+1.4
2,516,194	+		PFR28_02192	0.80	+1.9
2,516,273	-		PFR28_02192	0.85	+0.6
2,516,273	-		PFR28_02192	0.85	-0.3
2,516,273	-		PFR28_02192	0.85	-0.8
2,516,345	-		PFR28_02192	0.90	+0.2
2,516,345	-		PFR28_02192	0.90	-0.8
2,516,345	-		PFR28_02192	0.90	+0.2
2,516,377	+				-1.0
2,516,377	+				+0.4
2,516,496	-				-1.8
2,516,568	+				-0.3
2,516,569	-				-0.4
2,516,575	-				-2.1
2,516,592	+				-0.0
2,516,593	-				-1.8
2,516,593	-				-1.7
2,516,871	-		PFR28_02193	0.12	-1.6
2,516,898	+		PFR28_02193	0.13	+0.0
2,516,898	+		PFR28_02193	0.13	-0.3
2,516,898	+		PFR28_02193	0.13	-0.0
2,516,899	-		PFR28_02193	0.13	+1.2
2,516,962	+		PFR28_02193	0.15	-1.1
2,516,962	+		PFR28_02193	0.15	-1.2
2,516,964	+		PFR28_02193	0.15	-1.3
2,516,964	+		PFR28_02193	0.15	+1.1
2,516,964	+		PFR28_02193	0.15	+0.2
2,516,964	+		PFR28_02193	0.15	+0.2
2,516,964	+		PFR28_02193	0.15	+2.5
2,516,964	+		PFR28_02193	0.15	-1.0
2,516,964	+		PFR28_02193	0.15	+0.9
2,516,964	+		PFR28_02193	0.15	-0.4
2,516,964	+		PFR28_02193	0.15	-0.5
2,516,964	+		PFR28_02193	0.15	+0.2
2,516,964	+		PFR28_02193	0.15	+0.4
2,516,965	-		PFR28_02193	0.15	+0.7
2,516,965	-		PFR28_02193	0.15	+0.3
2,516,965	-		PFR28_02193	0.15	-1.4
2,516,965	-		PFR28_02193	0.15	+0.2
2,516,965	-		PFR28_02193	0.15	+0.2
2,516,965	-		PFR28_02193	0.15	-0.0
2,516,973	+		PFR28_02193	0.15	-0.8
2,516,974	-		PFR28_02193	0.16	+1.4
2,516,974	-		PFR28_02193	0.16	+0.5
2,516,974	-		PFR28_02193	0.16	+0.2
2,516,994	+		PFR28_02193	0.16	-0.0
2,516,995	-		PFR28_02193	0.16	-1.2
2,516,995	-		PFR28_02193	0.16	-0.3
2,516,995	-		PFR28_02193	0.16	+0.2
2,517,235	-		PFR28_02193	0.24	+0.0
2,517,319	-		PFR28_02193	0.27	+1.1
2,517,319	-		PFR28_02193	0.27	+0.5
2,517,366	+		PFR28_02193	0.28	-0.7
2,517,366	+		PFR28_02193	0.28	-0.1
2,517,366	+		PFR28_02193	0.28	+0.0
2,517,366	+		PFR28_02193	0.28	+1.2
2,517,367	-		PFR28_02193	0.28	+0.4
2,517,367	-		PFR28_02193	0.28	-0.1
2,517,367	-		PFR28_02193	0.28	+0.2
2,517,367	-		PFR28_02193	0.28	-0.1
2,517,393	+		PFR28_02193	0.29	+0.7
2,517,393	+		PFR28_02193	0.29	+0.2