Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_4524

Experiment: Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_4522 and EX28DRAFT_4523 are separated by 291 nucleotidesEX28DRAFT_4523 and EX28DRAFT_4524 are separated by 66 nucleotidesEX28DRAFT_4524 and EX28DRAFT_4525 are separated by 4 nucleotidesEX28DRAFT_4525 and EX28DRAFT_4526 are separated by 253 nucleotides EX28DRAFT_4522: EX28DRAFT_4522 - ribosomal protein L1, bacterial/chloroplast, at 1,889 to 2,593 _4522 EX28DRAFT_4523: EX28DRAFT_4523 - LSU ribosomal protein L10P, at 2,885 to 3,382 _4523 EX28DRAFT_4524: EX28DRAFT_4524 - ribosomal protein L7/L12, at 3,449 to 3,814 _4524 EX28DRAFT_4525: EX28DRAFT_4525 - RNA, at 3,819 to 3,880 _4525 EX28DRAFT_4526: EX28DRAFT_4526 - DNA-directed RNA polymerase, beta subunit, at 4,134 to 8,162 _4526 Position (kb) 3 4Strain fitness (log2 ratio) -1 0 1at 2.592 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
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2,592 - -1.7

Or see this region's nucleotide sequence