Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE41_RS05440 and ABIE41_RS05445 are separated by 129 nucleotides ABIE41_RS05445 and ABIE41_RS05450 overlap by 4 nucleotides ABIE41_RS05450 and ABIE41_RS05455 are separated by 4 nucleotides
ABIE41_RS05440: ABIE41_RS05440 - flagellar protein export ATPase FliI, at 1,125,625 to 1,126,947
_RS05440
ABIE41_RS05445: ABIE41_RS05445 - hypothetical protein, at 1,127,077 to 1,127,532
_RS05445
ABIE41_RS05450: ABIE41_RS05450 - hypothetical protein, at 1,127,529 to 1,128,008
_RS05450
ABIE41_RS05455: ABIE41_RS05455 - rod-binding protein, at 1,128,013 to 1,128,645
_RS05455
Position (kb)
1127
1128 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 1126.357 kb on + strand, within ABIE41_RS05440 at 1126.358 kb on - strand, within ABIE41_RS05440 at 1126.358 kb on - strand, within ABIE41_RS05440 at 1126.358 kb on - strand, within ABIE41_RS05440 at 1126.471 kb on + strand, within ABIE41_RS05440 at 1126.471 kb on + strand, within ABIE41_RS05440 at 1126.471 kb on + strand, within ABIE41_RS05440 at 1126.471 kb on + strand, within ABIE41_RS05440 at 1126.472 kb on - strand, within ABIE41_RS05440 at 1126.473 kb on + strand, within ABIE41_RS05440 at 1126.474 kb on - strand, within ABIE41_RS05440 at 1126.505 kb on + strand, within ABIE41_RS05440 at 1126.506 kb on - strand, within ABIE41_RS05440 at 1126.506 kb on - strand, within ABIE41_RS05440 at 1126.867 kb on + strand at 1126.867 kb on + strand at 1126.867 kb on + strand at 1126.867 kb on + strand at 1126.867 kb on + strand at 1126.868 kb on - strand at 1126.868 kb on - strand at 1126.868 kb on - strand at 1126.964 kb on + strand at 1126.965 kb on - strand at 1127.105 kb on + strand at 1127.105 kb on + strand at 1127.105 kb on + strand at 1127.105 kb on + strand at 1127.105 kb on + strand at 1127.106 kb on - strand at 1127.106 kb on - strand at 1127.106 kb on - strand at 1127.106 kb on - strand at 1127.106 kb on - strand at 1127.106 kb on - strand at 1127.106 kb on - strand at 1127.106 kb on - strand at 1127.240 kb on + strand, within ABIE41_RS05445 at 1127.240 kb on + strand, within ABIE41_RS05445 at 1127.241 kb on - strand, within ABIE41_RS05445 at 1127.241 kb on - strand, within ABIE41_RS05445 at 1127.241 kb on - strand, within ABIE41_RS05445 at 1127.270 kb on + strand, within ABIE41_RS05445 at 1127.270 kb on + strand, within ABIE41_RS05445 at 1127.270 kb on + strand, within ABIE41_RS05445 at 1127.270 kb on + strand, within ABIE41_RS05445 at 1127.270 kb on + strand, within ABIE41_RS05445 at 1127.271 kb on - strand, within ABIE41_RS05445 at 1127.271 kb on - strand, within ABIE41_RS05445 at 1127.271 kb on - strand, within ABIE41_RS05445 at 1127.271 kb on - strand, within ABIE41_RS05445 at 1127.271 kb on - strand, within ABIE41_RS05445 at 1127.271 kb on - strand, within ABIE41_RS05445 at 1127.271 kb on - strand, within ABIE41_RS05445 at 1127.271 kb on - strand, within ABIE41_RS05445 at 1127.271 kb on - strand, within ABIE41_RS05445 at 1127.342 kb on + strand, within ABIE41_RS05445 at 1127.342 kb on + strand, within ABIE41_RS05445 at 1127.342 kb on + strand, within ABIE41_RS05445 at 1127.342 kb on + strand, within ABIE41_RS05445 at 1127.342 kb on + strand, within ABIE41_RS05445 at 1127.343 kb on - strand, within ABIE41_RS05445 at 1127.343 kb on - strand, within ABIE41_RS05445 at 1127.343 kb on - strand, within ABIE41_RS05445 at 1127.343 kb on - strand, within ABIE41_RS05445 at 1127.399 kb on + strand, within ABIE41_RS05445 at 1127.399 kb on + strand, within ABIE41_RS05445 at 1127.400 kb on - strand, within ABIE41_RS05445 at 1127.400 kb on - strand, within ABIE41_RS05445 at 1127.400 kb on - strand, within ABIE41_RS05445 at 1127.584 kb on + strand, within ABIE41_RS05450 at 1127.584 kb on + strand, within ABIE41_RS05450 at 1127.584 kb on + strand, within ABIE41_RS05450 at 1127.584 kb on + strand, within ABIE41_RS05450 at 1127.584 kb on + strand, within ABIE41_RS05450 at 1127.585 kb on - strand, within ABIE41_RS05450 at 1127.585 kb on - strand, within ABIE41_RS05450 at 1127.585 kb on - strand, within ABIE41_RS05450 at 1127.585 kb on - strand, within ABIE41_RS05450 at 1127.585 kb on - strand, within ABIE41_RS05450 at 1127.585 kb on - strand, within ABIE41_RS05450 at 1127.585 kb on - strand, within ABIE41_RS05450
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 1,126,357 + ABIE41_RS05440 0.55 -1.3 1,126,358 - ABIE41_RS05440 0.55 +0.2 1,126,358 - ABIE41_RS05440 0.55 -1.9 1,126,358 - ABIE41_RS05440 0.55 +0.2 1,126,471 + ABIE41_RS05440 0.64 -0.4 1,126,471 + ABIE41_RS05440 0.64 -2.0 1,126,471 + ABIE41_RS05440 0.64 -0.9 1,126,471 + ABIE41_RS05440 0.64 +0.1 1,126,472 - ABIE41_RS05440 0.64 -0.0 1,126,473 + ABIE41_RS05440 0.64 +0.3 1,126,474 - ABIE41_RS05440 0.64 -1.3 1,126,505 + ABIE41_RS05440 0.67 -1.1 1,126,506 - ABIE41_RS05440 0.67 +1.8 1,126,506 - ABIE41_RS05440 0.67 -1.9 1,126,867 + -0.3 1,126,867 + -0.0 1,126,867 + -1.6 1,126,867 + +0.5 1,126,867 + +0.5 1,126,868 - +0.1 1,126,868 - -1.9 1,126,868 - +1.2 1,126,964 + +1.0 1,126,965 - +0.4 1,127,105 + -1.2 1,127,105 + -0.0 1,127,105 + -1.0 1,127,105 + -0.4 1,127,105 + -0.2 1,127,106 - +0.1 1,127,106 - -0.9 1,127,106 - +0.5 1,127,106 - -1.0 1,127,106 - -2.7 1,127,106 - +0.2 1,127,106 - +0.8 1,127,106 - -0.6 1,127,240 + ABIE41_RS05445 0.36 -0.9 1,127,240 + ABIE41_RS05445 0.36 +0.2 1,127,241 - ABIE41_RS05445 0.36 -0.3 1,127,241 - ABIE41_RS05445 0.36 +0.0 1,127,241 - ABIE41_RS05445 0.36 +0.2 1,127,270 + ABIE41_RS05445 0.42 +0.5 1,127,270 + ABIE41_RS05445 0.42 -0.2 1,127,270 + ABIE41_RS05445 0.42 -2.0 1,127,270 + ABIE41_RS05445 0.42 +0.4 1,127,270 + ABIE41_RS05445 0.42 +0.4 1,127,271 - ABIE41_RS05445 0.43 -1.4 1,127,271 - ABIE41_RS05445 0.43 +0.0 1,127,271 - ABIE41_RS05445 0.43 -0.4 1,127,271 - ABIE41_RS05445 0.43 +0.2 1,127,271 - ABIE41_RS05445 0.43 -0.9 1,127,271 - ABIE41_RS05445 0.43 -0.7 1,127,271 - ABIE41_RS05445 0.43 -1.2 1,127,271 - ABIE41_RS05445 0.43 +0.6 1,127,271 - ABIE41_RS05445 0.43 -2.0 1,127,342 + ABIE41_RS05445 0.58 -0.5 1,127,342 + ABIE41_RS05445 0.58 +1.6 1,127,342 + ABIE41_RS05445 0.58 +0.2 1,127,342 + ABIE41_RS05445 0.58 -0.3 1,127,342 + ABIE41_RS05445 0.58 +0.3 1,127,343 - ABIE41_RS05445 0.58 +4.2 1,127,343 - ABIE41_RS05445 0.58 +0.8 1,127,343 - ABIE41_RS05445 0.58 +0.4 1,127,343 - ABIE41_RS05445 0.58 +0.9 1,127,399 + ABIE41_RS05445 0.71 -2.3 1,127,399 + ABIE41_RS05445 0.71 +0.2 1,127,400 - ABIE41_RS05445 0.71 -0.0 1,127,400 - ABIE41_RS05445 0.71 -1.2 1,127,400 - ABIE41_RS05445 0.71 -0.4 1,127,584 + ABIE41_RS05450 0.11 +2.6 1,127,584 + ABIE41_RS05450 0.11 -1.0 1,127,584 + ABIE41_RS05450 0.11 -0.7 1,127,584 + ABIE41_RS05450 0.11 -1.0 1,127,584 + ABIE41_RS05450 0.11 +1.6 1,127,585 - ABIE41_RS05450 0.12 -0.4 1,127,585 - ABIE41_RS05450 0.12 +0.8 1,127,585 - ABIE41_RS05450 0.12 +0.2 1,127,585 - ABIE41_RS05450 0.12 +2.0 1,127,585 - ABIE41_RS05450 0.12 +1.0 1,127,585 - ABIE41_RS05450 0.12 +0.8 1,127,585 - ABIE41_RS05450 0.12 +0.6
Or see this region's nucleotide sequence