Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS24635 and ABID97_RS24640 are separated by 184 nucleotides ABID97_RS24640 and ABID97_RS24645 are separated by 35 nucleotides ABID97_RS24645 and ABID97_RS24650 are separated by 575 nucleotides
ABID97_RS24635: ABID97_RS24635 - hypothetical protein, at 5,100,096 to 5,100,308
_RS24635
ABID97_RS24640: ABID97_RS24640 - OmpA family protein, at 5,100,493 to 5,101,077
_RS24640
ABID97_RS24645: ABID97_RS24645 - autotransporter outer membrane beta-barrel domain-containing protein, at 5,101,113 to 5,106,347
_RS24645
ABID97_RS24650: ABID97_RS24650 - lysophospholipid acyltransferase family protein, at 5,106,923 to 5,107,669
_RS24650
Position (kb) 5101
5102
5103
5104
5105
5106
5107 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5100.285 kb on + strand, within ABID97_RS24635 at 5100.286 kb on - strand, within ABID97_RS24635 at 5100.300 kb on + strand at 5100.300 kb on + strand at 5100.300 kb on + strand at 5100.301 kb on - strand at 5100.410 kb on + strand at 5100.450 kb on + strand at 5100.450 kb on + strand at 5100.451 kb on - strand at 5100.454 kb on + strand at 5100.455 kb on - strand at 5100.455 kb on - strand at 5100.455 kb on - strand at 5100.478 kb on + strand at 5100.479 kb on - strand at 5100.479 kb on - strand at 5100.479 kb on - strand at 5100.480 kb on + strand at 5100.480 kb on + strand at 5100.480 kb on + strand at 5100.480 kb on + strand at 5100.663 kb on - strand, within ABID97_RS24640 at 5101.183 kb on + strand at 5101.204 kb on + strand at 5101.204 kb on + strand at 5101.204 kb on + strand at 5101.850 kb on - strand, within ABID97_RS24645 at 5102.272 kb on + strand, within ABID97_RS24645 at 5102.272 kb on + strand, within ABID97_RS24645 at 5102.272 kb on + strand, within ABID97_RS24645 at 5102.273 kb on - strand, within ABID97_RS24645 at 5102.915 kb on - strand, within ABID97_RS24645 at 5103.055 kb on + strand, within ABID97_RS24645 at 5103.055 kb on + strand, within ABID97_RS24645 at 5103.056 kb on - strand, within ABID97_RS24645 at 5103.328 kb on + strand, within ABID97_RS24645 at 5103.328 kb on + strand, within ABID97_RS24645 at 5103.328 kb on + strand, within ABID97_RS24645 at 5103.328 kb on + strand, within ABID97_RS24645 at 5103.329 kb on - strand, within ABID97_RS24645 at 5103.329 kb on - strand, within ABID97_RS24645 at 5103.329 kb on - strand, within ABID97_RS24645 at 5103.329 kb on - strand, within ABID97_RS24645 at 5103.809 kb on - strand, within ABID97_RS24645 at 5103.842 kb on + strand, within ABID97_RS24645 at 5103.843 kb on - strand, within ABID97_RS24645 at 5103.843 kb on - strand, within ABID97_RS24645 at 5103.991 kb on + strand, within ABID97_RS24645 at 5103.991 kb on + strand, within ABID97_RS24645 at 5103.992 kb on - strand, within ABID97_RS24645 at 5103.992 kb on - strand, within ABID97_RS24645 at 5103.992 kb on - strand, within ABID97_RS24645 at 5104.026 kb on - strand, within ABID97_RS24645 at 5104.106 kb on + strand, within ABID97_RS24645 at 5104.258 kb on + strand, within ABID97_RS24645 at 5104.258 kb on + strand, within ABID97_RS24645 at 5104.259 kb on - strand, within ABID97_RS24645 at 5104.259 kb on - strand, within ABID97_RS24645 at 5104.381 kb on + strand, within ABID97_RS24645 at 5104.381 kb on + strand, within ABID97_RS24645 at 5104.729 kb on + strand, within ABID97_RS24645 at 5104.729 kb on + strand, within ABID97_RS24645 at 5104.729 kb on + strand, within ABID97_RS24645 at 5104.729 kb on + strand, within ABID97_RS24645 at 5104.729 kb on + strand, within ABID97_RS24645 at 5104.730 kb on - strand, within ABID97_RS24645 at 5104.730 kb on - strand, within ABID97_RS24645 at 5104.730 kb on - strand, within ABID97_RS24645 at 5105.108 kb on + strand, within ABID97_RS24645 at 5105.108 kb on + strand, within ABID97_RS24645 at 5105.109 kb on - strand, within ABID97_RS24645 at 5105.273 kb on - strand, within ABID97_RS24645 at 5105.301 kb on - strand, within ABID97_RS24645 at 5105.301 kb on - strand, within ABID97_RS24645 at 5105.301 kb on - strand, within ABID97_RS24645 at 5105.301 kb on - strand, within ABID97_RS24645 at 5105.366 kb on - strand, within ABID97_RS24645 at 5105.366 kb on - strand, within ABID97_RS24645 at 5105.404 kb on + strand, within ABID97_RS24645 at 5105.405 kb on - strand, within ABID97_RS24645 at 5105.405 kb on - strand, within ABID97_RS24645 at 5105.510 kb on - strand, within ABID97_RS24645 at 5105.545 kb on + strand, within ABID97_RS24645 at 5105.545 kb on + strand, within ABID97_RS24645 at 5105.545 kb on + strand, within ABID97_RS24645 at 5105.545 kb on + strand, within ABID97_RS24645 at 5105.546 kb on - strand, within ABID97_RS24645 at 5105.546 kb on - strand, within ABID97_RS24645 at 5105.546 kb on - strand, within ABID97_RS24645 at 5105.554 kb on + strand, within ABID97_RS24645 at 5105.554 kb on + strand, within ABID97_RS24645 at 5105.644 kb on + strand, within ABID97_RS24645 at 5105.644 kb on + strand, within ABID97_RS24645 at 5105.693 kb on + strand, within ABID97_RS24645 at 5105.694 kb on - strand, within ABID97_RS24645 at 5105.694 kb on - strand, within ABID97_RS24645 at 5105.808 kb on - strand, within ABID97_RS24645 at 5105.834 kb on - strand at 5105.834 kb on - strand at 5105.834 kb on - strand at 5105.834 kb on - strand at 5105.935 kb on + strand at 5105.935 kb on + strand at 5105.935 kb on + strand at 5105.935 kb on + strand at 5105.936 kb on - strand at 5105.936 kb on - strand at 5105.936 kb on - strand at 5105.936 kb on - strand at 5106.103 kb on + strand at 5106.103 kb on + strand at 5106.104 kb on - strand at 5106.104 kb on - strand at 5106.104 kb on - strand at 5106.104 kb on - strand at 5106.110 kb on + strand at 5106.111 kb on - strand at 5106.322 kb on + strand at 5106.322 kb on + strand at 5106.334 kb on + strand at 5106.335 kb on - strand at 5106.488 kb on + strand at 5106.619 kb on + strand at 5106.620 kb on - strand at 5106.620 kb on - strand at 5106.632 kb on + strand at 5106.633 kb on - strand at 5106.705 kb on + strand at 5106.705 kb on + strand at 5106.705 kb on + strand at 5106.705 kb on + strand at 5106.706 kb on - strand at 5106.706 kb on - strand at 5106.706 kb on - strand at 5106.706 kb on - strand at 5106.709 kb on + strand at 5106.709 kb on + strand at 5106.709 kb on + strand at 5106.709 kb on + strand at 5106.710 kb on - strand at 5106.710 kb on - strand at 5106.710 kb on - strand at 5106.866 kb on - strand at 5107.093 kb on - strand, within ABID97_RS24650 at 5107.093 kb on - strand, within ABID97_RS24650 at 5107.329 kb on + strand, within ABID97_RS24650 at 5107.329 kb on + strand, within ABID97_RS24650 at 5107.330 kb on - strand, within ABID97_RS24650 at 5107.330 kb on - strand, within ABID97_RS24650 at 5107.330 kb on - strand, within ABID97_RS24650
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 5,100,285 + ABID97_RS24635 0.89 -0.3 5,100,286 - ABID97_RS24635 0.89 -0.1 5,100,300 + -0.4 5,100,300 + -0.0 5,100,300 + +0.2 5,100,301 - -0.0 5,100,410 + +0.5 5,100,450 + -0.0 5,100,450 + -0.1 5,100,451 - -0.9 5,100,454 + -2.1 5,100,455 - -0.1 5,100,455 - +0.5 5,100,455 - +0.2 5,100,478 + +0.9 5,100,479 - -0.1 5,100,479 - -0.2 5,100,479 - -0.2 5,100,480 + +0.0 5,100,480 + +1.7 5,100,480 + +0.3 5,100,480 + -0.5 5,100,663 - ABID97_RS24640 0.29 -0.0 5,101,183 + +0.4 5,101,204 + -0.0 5,101,204 + -0.9 5,101,204 + -0.1 5,101,850 - ABID97_RS24645 0.14 -0.2 5,102,272 + ABID97_RS24645 0.22 +0.1 5,102,272 + ABID97_RS24645 0.22 +0.2 5,102,272 + ABID97_RS24645 0.22 +0.5 5,102,273 - ABID97_RS24645 0.22 +0.2 5,102,915 - ABID97_RS24645 0.34 +0.4 5,103,055 + ABID97_RS24645 0.37 -0.2 5,103,055 + ABID97_RS24645 0.37 +0.2 5,103,056 - ABID97_RS24645 0.37 -0.7 5,103,328 + ABID97_RS24645 0.42 +0.9 5,103,328 + ABID97_RS24645 0.42 +0.2 5,103,328 + ABID97_RS24645 0.42 +0.4 5,103,328 + ABID97_RS24645 0.42 -1.1 5,103,329 - ABID97_RS24645 0.42 -0.3 5,103,329 - ABID97_RS24645 0.42 +0.2 5,103,329 - ABID97_RS24645 0.42 +0.2 5,103,329 - ABID97_RS24645 0.42 -0.1 5,103,809 - ABID97_RS24645 0.51 -0.3 5,103,842 + ABID97_RS24645 0.52 +0.2 5,103,843 - ABID97_RS24645 0.52 -0.0 5,103,843 - ABID97_RS24645 0.52 -0.5 5,103,991 + ABID97_RS24645 0.55 +0.6 5,103,991 + ABID97_RS24645 0.55 +0.4 5,103,992 - ABID97_RS24645 0.55 +0.7 5,103,992 - ABID97_RS24645 0.55 +0.2 5,103,992 - ABID97_RS24645 0.55 +0.4 5,104,026 - ABID97_RS24645 0.56 -0.0 5,104,106 + ABID97_RS24645 0.57 -0.1 5,104,258 + ABID97_RS24645 0.60 +0.1 5,104,258 + ABID97_RS24645 0.60 -0.1 5,104,259 - ABID97_RS24645 0.60 -0.1 5,104,259 - ABID97_RS24645 0.60 -0.3 5,104,381 + ABID97_RS24645 0.62 +0.6 5,104,381 + ABID97_RS24645 0.62 -0.4 5,104,729 + ABID97_RS24645 0.69 +1.0 5,104,729 + ABID97_RS24645 0.69 +0.6 5,104,729 + ABID97_RS24645 0.69 -0.3 5,104,729 + ABID97_RS24645 0.69 +0.2 5,104,729 + ABID97_RS24645 0.69 +0.1 5,104,730 - ABID97_RS24645 0.69 +1.0 5,104,730 - ABID97_RS24645 0.69 -0.2 5,104,730 - ABID97_RS24645 0.69 -0.2 5,105,108 + ABID97_RS24645 0.76 -1.5 5,105,108 + ABID97_RS24645 0.76 +0.4 5,105,109 - ABID97_RS24645 0.76 -0.1 5,105,273 - ABID97_RS24645 0.79 +0.2 5,105,301 - ABID97_RS24645 0.80 +0.0 5,105,301 - ABID97_RS24645 0.80 +0.1 5,105,301 - ABID97_RS24645 0.80 +0.2 5,105,301 - ABID97_RS24645 0.80 -0.0 5,105,366 - ABID97_RS24645 0.81 -0.4 5,105,366 - ABID97_RS24645 0.81 +0.2 5,105,404 + ABID97_RS24645 0.82 -1.0 5,105,405 - ABID97_RS24645 0.82 -0.4 5,105,405 - ABID97_RS24645 0.82 +0.2 5,105,510 - ABID97_RS24645 0.84 +0.1 5,105,545 + ABID97_RS24645 0.85 +1.4 5,105,545 + ABID97_RS24645 0.85 -0.2 5,105,545 + ABID97_RS24645 0.85 -0.2 5,105,545 + ABID97_RS24645 0.85 +1.0 5,105,546 - ABID97_RS24645 0.85 -0.6 5,105,546 - ABID97_RS24645 0.85 -0.4 5,105,546 - ABID97_RS24645 0.85 +0.0 5,105,554 + ABID97_RS24645 0.85 -0.1 5,105,554 + ABID97_RS24645 0.85 +0.3 5,105,644 + ABID97_RS24645 0.87 -0.1 5,105,644 + ABID97_RS24645 0.87 +0.8 5,105,693 + ABID97_RS24645 0.87 -0.1 5,105,694 - ABID97_RS24645 0.88 -0.6 5,105,694 - ABID97_RS24645 0.88 -0.6 5,105,808 - ABID97_RS24645 0.90 +0.1 5,105,834 - +0.5 5,105,834 - +0.0 5,105,834 - +1.4 5,105,834 - -0.3 5,105,935 + +0.0 5,105,935 + -0.5 5,105,935 + -0.2 5,105,935 + -0.1 5,105,936 - +0.4 5,105,936 - +1.7 5,105,936 - -0.1 5,105,936 - -0.4 5,106,103 + +1.3 5,106,103 + -0.3 5,106,104 - -0.1 5,106,104 - +0.2 5,106,104 - +0.3 5,106,104 - -0.0 5,106,110 + +0.6 5,106,111 - -0.2 5,106,322 + -0.4 5,106,322 + -0.5 5,106,334 + -0.5 5,106,335 - -0.5 5,106,488 + +0.5 5,106,619 + -0.2 5,106,620 - -0.2 5,106,620 - -0.8 5,106,632 + +0.2 5,106,633 - +2.4 5,106,705 + -0.2 5,106,705 + -1.3 5,106,705 + +0.2 5,106,705 + -0.2 5,106,706 - -0.4 5,106,706 - -0.6 5,106,706 - -0.3 5,106,706 - -0.2 5,106,709 + -0.0 5,106,709 + +0.2 5,106,709 + +0.4 5,106,709 + +0.3 5,106,710 - +0.4 5,106,710 - +1.1 5,106,710 - -0.3 5,106,866 - +0.4 5,107,093 - ABID97_RS24650 0.23 -0.5 5,107,093 - ABID97_RS24650 0.23 -0.7 5,107,329 + ABID97_RS24650 0.54 -0.1 5,107,329 + ABID97_RS24650 0.54 -0.1 5,107,330 - ABID97_RS24650 0.54 -0.3 5,107,330 - ABID97_RS24650 0.54 +0.8 5,107,330 - ABID97_RS24650 0.54 -0.3
Or see this region's nucleotide sequence