Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS21725 and ABID97_RS21730 are separated by 128 nucleotides ABID97_RS21730 and ABID97_RS21735 are separated by 35 nucleotides ABID97_RS21735 and ABID97_RS21740 are separated by 27 nucleotides
ABID97_RS21725: ABID97_RS21725 - aldo/keto reductase, at 4,491,103 to 4,492,116
_RS21725
ABID97_RS21730: ABID97_RS21730 - LysR substrate-binding domain-containing protein, at 4,492,245 to 4,493,144
_RS21730
ABID97_RS21735: ABID97_RS21735 - MetQ/NlpA family ABC transporter substrate-binding protein, at 4,493,180 to 4,494,001
_RS21735
ABID97_RS21740: ABID97_RS21740 - methionine ABC transporter permease, at 4,494,029 to 4,494,691
_RS21740
Position (kb)
4492
4493
4494 Strain fitness (log2 ratio)
-2
-1
0
1 at 4491.500 kb on + strand, within ABID97_RS21725 at 4491.501 kb on - strand, within ABID97_RS21725 at 4491.575 kb on + strand, within ABID97_RS21725 at 4491.576 kb on - strand, within ABID97_RS21725 at 4491.697 kb on + strand, within ABID97_RS21725 at 4491.697 kb on + strand, within ABID97_RS21725 at 4491.697 kb on + strand, within ABID97_RS21725 at 4491.697 kb on + strand, within ABID97_RS21725 at 4491.697 kb on + strand, within ABID97_RS21725 at 4491.698 kb on - strand, within ABID97_RS21725 at 4491.699 kb on - strand, within ABID97_RS21725 at 4491.743 kb on + strand, within ABID97_RS21725 at 4491.743 kb on + strand, within ABID97_RS21725 at 4491.744 kb on - strand, within ABID97_RS21725 at 4491.756 kb on - strand, within ABID97_RS21725 at 4491.782 kb on + strand, within ABID97_RS21725 at 4491.782 kb on + strand, within ABID97_RS21725 at 4491.783 kb on - strand, within ABID97_RS21725 at 4491.911 kb on - strand, within ABID97_RS21725 at 4492.767 kb on + strand, within ABID97_RS21730 at 4492.971 kb on + strand, within ABID97_RS21730 at 4492.971 kb on + strand, within ABID97_RS21730 at 4492.971 kb on + strand, within ABID97_RS21730 at 4492.971 kb on + strand, within ABID97_RS21730 at 4492.972 kb on - strand, within ABID97_RS21730 at 4492.972 kb on - strand, within ABID97_RS21730 at 4492.972 kb on - strand, within ABID97_RS21730 at 4492.987 kb on - strand, within ABID97_RS21730 at 4493.068 kb on - strand at 4493.181 kb on + strand at 4493.181 kb on + strand at 4493.181 kb on + strand at 4493.182 kb on - strand at 4493.322 kb on + strand, within ABID97_RS21735 at 4493.646 kb on + strand, within ABID97_RS21735 at 4493.647 kb on - strand, within ABID97_RS21735 at 4493.790 kb on + strand, within ABID97_RS21735 at 4493.790 kb on + strand, within ABID97_RS21735 at 4494.142 kb on - strand, within ABID97_RS21740 at 4494.142 kb on - strand, within ABID97_RS21740
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 4,491,500 + ABID97_RS21725 0.39 +0.3 4,491,501 - ABID97_RS21725 0.39 -1.3 4,491,575 + ABID97_RS21725 0.47 +0.2 4,491,576 - ABID97_RS21725 0.47 +0.1 4,491,697 + ABID97_RS21725 0.59 -0.2 4,491,697 + ABID97_RS21725 0.59 -1.6 4,491,697 + ABID97_RS21725 0.59 +0.4 4,491,697 + ABID97_RS21725 0.59 -0.2 4,491,697 + ABID97_RS21725 0.59 -0.2 4,491,698 - ABID97_RS21725 0.59 +0.2 4,491,699 - ABID97_RS21725 0.59 -0.0 4,491,743 + ABID97_RS21725 0.63 -0.1 4,491,743 + ABID97_RS21725 0.63 -0.4 4,491,744 - ABID97_RS21725 0.63 -0.3 4,491,756 - ABID97_RS21725 0.64 +0.4 4,491,782 + ABID97_RS21725 0.67 +0.5 4,491,782 + ABID97_RS21725 0.67 -0.6 4,491,783 - ABID97_RS21725 0.67 -0.2 4,491,911 - ABID97_RS21725 0.80 +0.1 4,492,767 + ABID97_RS21730 0.58 -0.7 4,492,971 + ABID97_RS21730 0.81 -0.1 4,492,971 + ABID97_RS21730 0.81 -0.2 4,492,971 + ABID97_RS21730 0.81 -0.3 4,492,971 + ABID97_RS21730 0.81 +1.6 4,492,972 - ABID97_RS21730 0.81 +0.1 4,492,972 - ABID97_RS21730 0.81 -0.4 4,492,972 - ABID97_RS21730 0.81 -0.6 4,492,987 - ABID97_RS21730 0.82 -0.3 4,493,068 - +0.0 4,493,181 + -0.5 4,493,181 + -0.3 4,493,181 + -1.6 4,493,182 - +0.1 4,493,322 + ABID97_RS21735 0.17 +0.7 4,493,646 + ABID97_RS21735 0.57 -0.3 4,493,647 - ABID97_RS21735 0.57 -2.1 4,493,790 + ABID97_RS21735 0.74 -0.1 4,493,790 + ABID97_RS21735 0.74 -0.1 4,494,142 - ABID97_RS21740 0.17 -0.1 4,494,142 - ABID97_RS21740 0.17 +1.3
Or see this region's nucleotide sequence