Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS20560 and ABID97_RS20565 are separated by 13 nucleotides ABID97_RS20565 and ABID97_RS20570 are separated by 55 nucleotides
ABID97_RS20560: ABID97_RS20560 - CmpA/NrtA family ABC transporter substrate-binding protein, at 4,243,683 to 4,244,927
_RS20560
ABID97_RS20565: ABID97_RS20565 - nitrate ABC transporter permease, at 4,244,941 to 4,245,873
_RS20565
ABID97_RS20570: ABID97_RS20570 - ABC transporter ATP-binding protein, at 4,245,929 to 4,246,738
_RS20570
Position (kb) 4244
4245
4246 Strain fitness (log2 ratio) -1
0
1 at 4243.986 kb on + strand, within ABID97_RS20560 at 4243.999 kb on - strand, within ABID97_RS20560 at 4244.209 kb on - strand, within ABID97_RS20560 at 4244.211 kb on + strand, within ABID97_RS20560 at 4244.559 kb on + strand, within ABID97_RS20560 at 4244.559 kb on + strand, within ABID97_RS20560 at 4244.559 kb on + strand, within ABID97_RS20560 at 4244.560 kb on - strand, within ABID97_RS20560 at 4244.659 kb on - strand, within ABID97_RS20560 at 4244.793 kb on + strand, within ABID97_RS20560 at 4244.793 kb on + strand, within ABID97_RS20560 at 4244.794 kb on - strand, within ABID97_RS20560 at 4244.794 kb on - strand, within ABID97_RS20560 at 4244.794 kb on - strand, within ABID97_RS20560 at 4245.562 kb on + strand, within ABID97_RS20565 at 4245.640 kb on + strand, within ABID97_RS20565 at 4245.947 kb on + strand at 4245.948 kb on - strand at 4246.179 kb on + strand, within ABID97_RS20570 at 4246.179 kb on + strand, within ABID97_RS20570 at 4246.233 kb on - strand, within ABID97_RS20570
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 4,243,986 + ABID97_RS20560 0.24 -0.3 4,243,999 - ABID97_RS20560 0.25 -0.5 4,244,209 - ABID97_RS20560 0.42 -1.5 4,244,211 + ABID97_RS20560 0.42 -0.3 4,244,559 + ABID97_RS20560 0.70 +0.4 4,244,559 + ABID97_RS20560 0.70 +0.5 4,244,559 + ABID97_RS20560 0.70 +0.3 4,244,560 - ABID97_RS20560 0.70 +0.9 4,244,659 - ABID97_RS20560 0.78 +0.1 4,244,793 + ABID97_RS20560 0.89 +0.3 4,244,793 + ABID97_RS20560 0.89 -0.3 4,244,794 - ABID97_RS20560 0.89 -0.3 4,244,794 - ABID97_RS20560 0.89 +0.1 4,244,794 - ABID97_RS20560 0.89 -0.0 4,245,562 + ABID97_RS20565 0.67 +0.3 4,245,640 + ABID97_RS20565 0.75 +0.5 4,245,947 + -0.5 4,245,948 - +0.0 4,246,179 + ABID97_RS20570 0.31 -0.2 4,246,179 + ABID97_RS20570 0.31 -0.5 4,246,233 - ABID97_RS20570 0.38 -0.1
Or see this region's nucleotide sequence